Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1883 161 2e-34 seq9 105 2e-17 >seq1883 Length=75506 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| ||||||||| | || ||| | || || Sbjct 35421 AGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCC 35480 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||| |||||| || || || ||| Sbjct 35481 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCC 35540 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || || | ||||||||| Sbjct 35541 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTC 35600 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || || || Sbjct 35601 TTGCCGGTGAGAGTCTTGACGAAGATCTG 35629 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| || ||||||||||| || | ||||||||||| || ||| Sbjct 35184 CGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTC 35243 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || |||||||||||||| || || ||||| |||||||||||||| || ||| || Sbjct 35244 CGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCC 35303 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||||| |||| ||||| | || ||| || || | Sbjct 35304 TCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTCCACCTCGAGG 35363 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| || || || || || ||||| Sbjct 35364 GTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTG 35401 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | ||||| Sbjct 35649 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 35708 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || || ||||||||||||||| || || || ||| Sbjct 35709 TCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 35768 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || || | ||||| ||| Sbjct 35769 TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTC 35828 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 35829 TTGCCGGTGAGGGTCTTGACGAAGATCTG 35857 >seq9 Length=228969 Score = 105 bits (116), Expect = 2e-17 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | ||||| || |||||||| |||||||||| Sbjct 118295 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 118354 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||| || |||||| || || || ||||| ||||| ||| ||| | Sbjct 118355 TCAATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 118414 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||||||||| ||||| ||||| | Sbjct 118415 CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGAGTCTTCACGA 118474 Query 199620 A 199620 | Sbjct 118475 A 118475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178882719902458