Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1883 140 3e-28
seq5 140 3e-28
seq1610 138 1e-27
seq9 91.5 1e-13
>seq1883
Length=75506
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| ||
Sbjct 35863 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 35804
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| ||||| || || | |||
Sbjct 35803 TCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 35744
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || |||| ||| ||||| ||||| || || | ||||||||| |||||||
Sbjct 35743 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 35684
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| ||||| ||||||| || | || || ||| || | |||||
Sbjct 35683 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGG 35634
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| |||| || || | |
Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| ||||| |||||| | |||||
Sbjct 35344 GACACGATCGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 35286
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | |||||||| |||||||| |||| || || || ||||||||
Sbjct 35285 GCAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAA 35226
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| |||||||||| |||||||||||| || | || ||
Sbjct 35225 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 35178
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| | ||
Sbjct 35632 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 35573
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || || | || ||
Sbjct 35572 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCA 35514
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || |||| ||||| || |||||||||
Sbjct 35513 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAA 35454
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | ||||| || | || || |||
Sbjct 35453 CATCCAGAAGGAGTCCACGCTCCACCTTGTCCTCCGT 35417
>seq5
Length=272196
Score = 140 bits (154), Expect = 3e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | ||
Sbjct 174361 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 174302
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| |||||| | ||||||
Sbjct 174301 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 174242
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || |||| || |||||| |||||| |||
Sbjct 174241 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTATAAC 174182
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| |||| |||||
Sbjct 174181 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 174147
>seq1610
Length=70883
Score = 138 bits (152), Expect = 1e-27
Identities = 330/486 (68%), Gaps = 20/486 (4%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAA-ATGAGCGTCATAAAATCCAAGGGGTT 132683
||||| || || || || || ||| |||||| | ||| | ||| || || || |||||
Sbjct 62450 TTCTCGAAGAAGTTGGTCTT-CCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAAGGGTT 62392
Query 132684 GGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740
| | |||||| ||| | |||||| || ||||||| || | |||||| |||||
Sbjct 62391 AGTAGACTTGTAGATCTTCTCGTTGCCGAG-AG--CGACGAGGAGACGGTCGGCGACGAA 62335
Query 132741 CTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGG-CAGCGCTT 132799
|||||||| ||| ||| | | ||| | || || || |||| || || || |
Sbjct 62334 TTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGTAGG-GCACAGGGCAAGGCCT 62276
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT---TTCCCTAACGCGCG 132856
|||| || || | ||| ||||| || || ||||| | ||| |||| ||||||
Sbjct 62275 CGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTCC---ACGCGCT 62219
Query 132857 CCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916
| ||| || || | || || ||||| |||||| || ||||| |||| |
Sbjct 62218 GCTTGCTGGGGCGGTTGTTCAGGTGTGAGAACAGCAAGCAGGCGAAGTCAGTGTGCAGAC 62159
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| | || |||||||||||| ||| |||| ||| ||||| || || || || |
Sbjct 62158 CCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCACGCTTCT 62099
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || |||| |||||| ||| ||||| | || ||||| || || || |
Sbjct 62098 TCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGACAGCAGCAAATG 62039
Query 133037 CCACCAGGCGCTCGCCGAACGT-GGCT-TCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094
| || ||||||| || | || | || | | ||| |||||| | ||| ||||| ||
Sbjct 62038 CAACAAGGCGCTGAGCGTAGGTAGACTCACGGTCCTG--GATCCACCTCAGAGCCCAGTC 61981
Query 133095 GGCCTT 133100
||||||
Sbjct 61980 GGCCTT 61975
Score = 131 bits (144), Expect = 2e-25
Identities = 178/248 (72%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| | | || |||||||| || || || ||||| | |
Sbjct 61823 TCGGAGTGGATGTTCTCCATCATGGTCTGGAAGCCGTAGAAACAACGGGCCTCAGGAATC 61764
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| || || | ||| ||||||| || |||||||| ||||||||||| |||||
Sbjct 61763 TGGACCTCAGCACTGAAGCGCTCGATCAAGTTTTCGTTAACGATGCCGTCCGAAGCGGCA 61704
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371
|| ||||| || | ||| |||||| | ||||| ||| |||| || | ||||
Sbjct 61703 AAGAAGGCGAGGATGTGGGAGATGAAGTATTTCTCGTCATCGGTCAAACGGTTGTTCCAG 61644
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| || |||||| |||||||| | |||||| ||||||| || ||||||||| ||
Sbjct 61643 TCGTGCAGGTCCTTAGACAGGTCAATCTCCTCAGCGGTCCAGAAGGACGCCTCGTGCTTC 61584
Query 133432 TTGTACAT 133439
||||||||
Sbjct 61583 TTGTACAT 61576
>seq9
Length=228969
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || || |||||| | || || ||| | |||||| | |
Sbjct 118475 TTCGTGAAGACTCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 118416
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || | || |||| ||||| ||||| || || | || |||||||| |
Sbjct 118415 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 118357
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| ||||| || || | ||||| || ||||||||||||||| ||
Sbjct 118356 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 118297
Query 38432 GG 38433
||
Sbjct 118296 GG 118295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500156706940160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |