Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq70 370 1e-97 seq1654 172 7e-38 seq2076 120 4e-22 seq17 89.7 7e-13 >seq70 Length=90055 Score = 370 bits (410), Expect = 1e-97 Identities = 717/1056 (68%), Gaps = 8/1056 (1%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| || || ||||| |||||||| || | || || Sbjct 65336 ATGGCGGCCTGGACGGCGGCACCGTAGGCAACTGCCTCGTCGGGGTTGATGGACTTGTTT 65277 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || || || | | | | || || ||||| || || || Sbjct 65276 GGCTCCTTCCCGTTGAAGTAGTCGGTAATGAGCTTCTGGATACGGGGGATACGAGTAGAA 65217 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || || |||| ||||| || | || | || || |||||||| | ||| || Sbjct 65216 CCGCCAACCAGGACGATCTCGTGAACCTGAGACTTGTCGATCTTAGCGTCCGTCAGGACA 65157 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 |||||||| | || ||||| | |||| || || ||||| ||||| ||| Sbjct 65156 CGGTCGACAGGCTGCAGGGTGGAGCGGAAAAGGTCCTGGCAAAGCTCCTCGAAACGAGCA 65097 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| ||||| || ||||| || | || ||| | | || || || || || | || Sbjct 65096 CGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAACAGGGAGTCGATCTCGATCGAGGTC 65037 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || |||| |||||| | ||| ||||| || ||||| || || ||||| | |||||| | Sbjct 65036 TGGGCCGACGAAGAGAGCGTACGCTTCGCACGCTCGCAAGCAGTTCGGAGACGACGCAAA 64977 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 || || ||||| | | || |||||||| || ||||| ||||||| | |||||| Sbjct 64976 GCCCGGGGGTTGGAGCTTAAGTCCTTCTTATGCTTGCGTTTGAACTCTTGAACGAAGTGG 64917 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 | || | ||||| || |||||||||| ||| || || || ||||| | ||| Sbjct 64916 TTGACCAGACGGTTGTCGAAGTCCTCACCACCCAGGTGAGTGTCACCAGCGGTGGACTTG 64857 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 ||||| ||||| ||| | || ||| | | | |||||||| || |||||||||||||| Sbjct 64856 ACTTCGAAGATGCCTTCCTCGATGGTCAGGAGGGAAACATCGAAGGTACCACCACCCAGA 64797 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 || || || || ||||| ||| | || ||||| ||||||||||| ||||| || Sbjct 64796 TCGAAGATAAGGACGTTGCGCTCGCCCTCAACCTTCTTGTCGAGACCGTAGGCGATGGCA 64737 Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681 ||||| || || || || || ||||| || ||| ||||||||||| | ||||| Sbjct 64736 GCCGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCCAGCAATCAGACCGGCATCC 64677 Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741 || || || || || || || ||||| |||||||| || || || ||||| |||| || Sbjct 64676 TTGGTAGCCTGGCGCTGGGAGTCGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTGTTG 64617 Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA 7801 || | ||| || || | || ||| | || ||| ||||| || |||||||| ||| Sbjct 64616 ACGGTGCCACCCAGGTAGGCCTCAGCGGTCTCGCGCATCTTGGTCAGGACCATCGAGGAA 64557 Query 7802 ATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCA-TGGGTTT 7860 ||||| || | | || || || || || || || || || || || || | || || Sbjct 64556 ATCTCCTCGGGGGTGAAGTGCTTGGTCTCGCCCTTGAACTCGACCTCGATGACAGGCTTG 64497 Query 7861 ATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG 7920 | | | | | ||| ||||| | | | | ||||| ||| | || |||| Sbjct 64496 CTTCCCTTCTC----GATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGCACCTCAGA 64441 Query 7921 GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCAT 7980 |||| ||||| | || || | ||||| || || || || ||||| | ||||||||| Sbjct 64440 GTCCTGGAACTTGCGACCAATCAACCGCTTCGCGTCGAAGACGGTGTTGTGGGGGTTCAT 64381 Query 7981 GGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGAC 8040 ||| ||||||||||| || || ||||| ||||| || | || || || || || Sbjct 64380 GGCGACCTGGTTCTTCGCAGCATCGCCGATCAGACGCTC---TGTGTCGGTGAAAGCAAC 64324 Query 8041 GTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGC 8076 | | |||||||| || || || || |||||||| || Sbjct 64323 GAATGATGGGGTGGTACGGTTGCCCTGGTCGTTTGC 64288 >seq1654 Length=102226 Score = 172 bits (190), Expect = 7e-38 Identities = 504/768 (66%), Gaps = 15/768 (2%) Strand=Plus/Plus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||| |||| ||||| | || ||||| ||||| |||||||||||||| || | || | Sbjct 24843 GATGCCGGCCTGGACGGCAGCACCGTAGGCGACGGCCTCATCGGGGTTGATGGACTTCTC 24902 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 || | || |||| || || || | | | || || || ||||| || || || Sbjct 24903 GAGCTTCTTGCCGTCGAAGTAGTCGCTCAGGAGCTTCTGGATCTTGGGGATACGGGTAGA 24962 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 |||||||| | ||||| || | ||| || || ||||| | ||| || Sbjct 24963 ACCACCGACAAGGACGATCTCGTCGACTGCGGACTTCTCGATGCCAGCGTCCTTGAGAAC 25022 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA--CAGTTCCTCAAAACGT 7258 | ||| || |||| | | ||| ||| | | ||| ||||| ||||| Sbjct 25023 CTGGGTGACGGGGTCCAGAG--TGCCGGTGAAAGCCTTGGCGTTCAGGTCCTCGAAACGG 25080 Query 7259 GCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGG 7316 |||||||| || | |||| |||||| |||||||| | | || || || ||||| | Sbjct 25081 GCACGGGTGATCTGCATGTT--GAAATCCTCGCCGTCGAAGAGAGAGTCGATCTCAATAG 25138 Query 7317 TTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACG 7374 | | || || || | || | || ||||| || ||||| || || || || | ||| Sbjct 25139 TGGCCTGGGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAGCAGTGCGGAGACG 25196 Query 7375 ACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGA 7434 ||||||||||| | || ||||| | || ||||| || || || || | Sbjct 25197 TCGAAGGGCACGGGCGTCTCCGGACAGGTCCTTCTTCGTCTTTCGGGAGAATTCCTTCTT 25256 Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494 | |||| || || | | ||||| || | |||||||||||| || || || ||||| Sbjct 25257 GCAGTGGTCCAGCAGGTTGGTGTCGAAGTCCTGACCACCCAAGTGGGTGTCACCGGCGGT 25316 Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554 || ||||| |||| ||| || | ||||| | || || ||||| || |||||||| Sbjct 25317 GGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGCAGGGACACATCGAAGGTACCACC 25376 Query 7555 ACCCAGGTCAAAAATGAGTACGTT-CGT--ATCGTCGTCTTTGTTCTTATCGAGACCGTA 7611 |||||| || | || || ||||| ||| | || | ||||| |||||||||| Sbjct 25377 ACCCAGATCGTAGATCAGGACGTTGCGTTCCTTGTTGGACTTGTTGGAGCCGAGACCGTA 25436 Query 7612 CGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGT 7671 || || || || || || || || || || ||||| || |||||| || | || | Sbjct 25437 GGCAATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTCAGACCGGAGATGGA 25496 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || || || || || ||||| |||||||| ||||| || | ||| Sbjct 25497 ACCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTAATGAC 25556 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || | | ||| ||||| ||||| | | || ||||| || ||||| Sbjct 25557 GGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCGGCGATCTCCTTCAT 25604 >seq2076 Length=57101 Score = 120 bits (132), Expect = 4e-22 Identities = 242/356 (68%), Gaps = 5/356 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| ||||| || || || || ||| || |||| ||| Sbjct 1975 TCGAAATCCTCACCACCAAGGTGGGTATCACCAGCAGTAGCCAAGACCTCGAAGACACCC 2034 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || ||||| || ||||||||||| || || | | || | Sbjct 2035 TGGTCGATCGACAGGAGAGAGACATCGAAAGTACCACCACCAAGATCGTAGACGATGATC 2094 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| | |||| || ||||||||||| ||||| || ||||| || ||| Sbjct 2095 TGACGCTCAGTGTC---GGTCTTGTCCAGACCGTACGCAATAGCGGCAGCCGTGGGCTCA 2151 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695 || | || || || ||| |||||||| || | |||| ||||| || || || || || Sbjct 2152 TTGACGATGCGGAGGACGTTGAGGCCAGCGAT-GATGCCGGCATCCTTGGTAGCCTGACG 2210 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || || || |||| ||||| ||||| ||||| Sbjct 2211 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACAACAGCGTGGGTGACCTTCTTTCCGAG 2270 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || || | || ||||| ||| | | ||| | ||||| || |||| Sbjct 2271 GTAGCTCTCGGCAACCTCCTTCATCTTGCCCAAGATCATGGCCGAAATTTCCTCAG 2326 >seq17 Length=201905 Score = 89.7 bits (98), Expect = 7e-13 Identities = 289/445 (65%), Gaps = 13/445 (3%) Strand=Plus/Minus Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618 || || || |||||||| | ||| || ||||| | ||| |||||||| ||| | Sbjct 88161 TCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGG 88102 Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678 ||||||| | || || ||| || | ||||| || |||| | ||| ||||||||| Sbjct 88101 ACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCAT 88042 Query 105679 GGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATA 105731 || || | |||| |||| || ||| ||| | | ||| |||| ||| || Sbjct 88041 GGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCC----TGATCGACGTA 87986 Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791 || || || ||| | || || ||||| || || || |||| ||| || || || || Sbjct 87985 TCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGT 87926 Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851 ||| || | || | ||||| | ||| |||| | ||||| || ||||| Sbjct 87925 GCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGC 87866 Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911 | ||| ||| ||||| || | ||||| || || || || || || || || Sbjct 87865 CATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTC 87806 Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970 ||| | ||| ||||| ||||| |||| || | ||| || || || |||||||||| Sbjct 87805 CTTCATGTCAACGAGGAAGCACGACGACAACTG-CGCCTGAGGCGTGCCGGCATTGAACA 87747 Query 105971 GAGTTGGTGTTGCATGAATGAACAA 105995 | ||||| | || || |||| || Sbjct 87746 GCGTTGGCGACGCGTGTGTGAAGAA 87722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635112364602160