Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq17 251 8e-62 >seq17 Length=201905 Score = 251 bits (278), Expect = 8e-62 Identities = 1139/1773 (64%), Gaps = 48/1773 (3%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGC-GCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 |||||||||| || ||| ||| ||||| | ||||| |||||||| || |||||||| Sbjct 89390 TGAACTGAATCGG-CGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGA 89332 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 105675 || | ||||| || | ||||| || || |||| ||| | || || | ||| Sbjct 89331 CCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCAT 89273 Query 105676 GAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCA 105733 | | |||| ||| |||| |||| |||||| |||||| | || ||||| | Sbjct 89272 GTGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGC 89215 Query 105734 ATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGG 105793 | || | || | ||| ||||| || || |||||| |||||| ||||||||| Sbjct 89214 ACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGG 89155 Query 105794 ATATCTGAGA-TATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTT 105852 || ||| || |||| || || || || || | || ||| | | ||||| |||| Sbjct 89154 ATG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTC 89096 Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTG--TTGACAATCACAAAC 105910 ||||| |||||| || | ||||| |||| || | || ||||||| ||| Sbjct 89095 AGACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAAC 89038 Query 105911 TCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTA 105970 || || ||||| | | | |||||||||| | || ||||| |||||||| || || Sbjct 89037 TCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTG 88978 Query 105971 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 106030 || |||| ||| || | || ||||| || ||||| || |||||||| | ||||| || Sbjct 88977 TTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGG 88918 Query 106031 AGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTT 106088 | ||| | | |||||| |||| | | |||||||| || || | || || Sbjct 88917 ACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTT 88859 Query 106089 CACCTTC--CCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGT 106146 || || |||||| || | || || | || ||||| |||||| ||||| ||| Sbjct 88858 GACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGA 88799 Query 106147 CTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACAT 106206 |||| || | | | || | ||||| || |||| ||||| || || Sbjct 88798 TGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGAT 88739 Query 106207 GGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAG 106261 ||| || ||||| | |||| ||| || ||| ||| || || |||| || Sbjct 88738 GGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAG 88679 Query 106262 CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321 | || ||| |||| || ||||| || || |||| |||||||| | ||| ||| Sbjct 88678 GGCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGC 88624 Query 106322 ATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 106381 || || ||| || || | ||| ||||| || | || |||| ||| || Sbjct 88623 ATGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGG 88564 Query 106382 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTC 106440 || || | || |||| ||| || || | | | | | | || | |||| Sbjct 88563 TTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATA-GCGCTCATTCTC 88505 Query 106441 TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 106500 | | ||| ||| ||| |||||||| || |||| ||||| ||||| ||| || Sbjct 88504 GTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCGTCAGG 88445 Query 106501 ATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 106560 | | | ||||| | || || || || | |||||| || ||| || || | ||||| Sbjct 88444 AGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTT 88385 Query 106561 TTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 106620 ||||| ||||| |||| ||||||||| | |||| |||| | || ||||| || Sbjct 88384 CTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGT 88325 Query 106621 CTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CG 106677 || | || ||| || || | ||| | | || ||| || || | | || |||| || Sbjct 88324 TTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCG 88268 Query 106678 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 106737 ||||| ||||||||| ||| || || || |||||||| || ||||| || Sbjct 88267 ACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAG 88208 Query 106738 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 106797 || || || || || || | |||| ||| | || || ||| || |||||||| Sbjct 88207 GCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCAT 88148 Query 106798 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCAC 106856 ||| || || || ||||| |||| ||||| || | | ||| || ||||||| | | Sbjct 88147 GAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTC 88089 Query 106857 CTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 106916 | ||||| || | || |||||||| | || ||| |||||||||||||| || |||| Sbjct 88088 CGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGA 88029 Query 106917 CTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAA 106973 || | || || || | ||| | |||| || || || || ||| ||| | Sbjct 88028 TGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGA 87969 Query 106974 ATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGA 107031 | || || | ||| || || || |||| || || || || || ||| || ||| Sbjct 87968 AGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG- 87910 Query 107032 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTG 107091 |||| | | |||| || | ||||| || |||||| ||| ||||| Sbjct 87909 -CCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCAT 87851 Query 107092 CGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAG 107151 ||||| | | || || ||||||| || | || ||||||||| || | | || Sbjct 87850 GGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAG 87791 Query 107152 GAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 107211 |||||| |||| ||||| || || || |||||||| || ||||| | ||||| Sbjct 87790 GAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTG 87731 Query 107212 AATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 107270 |||| | || | | |||||| | || ||| ||||| | || || |||| |||| Sbjct 87730 TGTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCC 87672 Query 107271 CGTGGATGCCGATGGCCACACGCATAAACATGT 107303 | |||||| | || |||||||| | ||||| Sbjct 87671 CCCAGATGCCAACAGCGACACGCATCAGCATGT 87639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589961817367760