Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1610 87.8 2e-12
>seq1610
Length=70883
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| ||| || || || ||| || || |||||||| | | || | ||| || ||
Sbjct 62189 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 62130
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || | ||||||||||| || | || || | |||||| || ||||| || | |||
Sbjct 62129 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 62070
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
||||| |||||||| || || ||||| ||||| || | | | || ||| |||
Sbjct 62069 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 62010
Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169
| || ||||| |||| ||||| || ||||||||
Sbjct 62009 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 61972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562090714149360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |