Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq229 159 3e-34
>seq229
Length=27093
Score = 159 bits (176), Expect = 3e-34
Identities = 224/313 (72%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 20126 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 20070
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104
||||||||| |||| || |||||| |||| ||| | ||||| ||| | || |||
Sbjct 20069 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCAC 20010
Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30164
| | | |||||| || || ||| || | |||||| || | | ||| ||||||
Sbjct 20009 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 19950
Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224
|| ||||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 19949 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 19890
Query 30225 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30284
| | | |||| |||||| || | | || |||||| ||||||||||||| || ||
Sbjct 19889 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCC 19830
Query 30285 CTTCTCGGAGAGC 30297
|| | || ||||
Sbjct 19829 CTGCGCGCTGAGC 19817
Score = 118 bits (130), Expect = 9e-22
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838
||||||| ||| ||||| ||| |||| |||||||| |||| ||||||||| |||||
Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360
Query 29839 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29897
|||| | ||| | || || ||||| | || | ||||| || ||||||| |||
Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301
Query 29898 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 29957
|| || | ||||||||||||||| || || || ||||| ||||| || | |||| |||
Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATATCGCAGGACCGCTG 20241
Query 29958 GTAGAGCTGACA 29969
||| ||||| ||
Sbjct 20240 GTACAGCTGGCA 20229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408604781410502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |