Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq17 405 1e-107 seq1610 134 3e-26 >seq17 Length=201905 Score = 405 bits (448), Expect = 1e-107 Identities = 1145/1739 (66%), Gaps = 60/1739 (3%) Strand=Plus/Minus Query 212691 TGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATG 212750 |||| |||||| ||||| |||||| ||||| | | | || || ||||| | | | Sbjct 89271 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89212 Query 212751 ATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAG 212810 || ||||| |||| |||||| ||||||||| ||| | |||| ||| ||||||| | Sbjct 89211 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 89152 Query 212811 CCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGT 212862 | | | || ||||| | ||| || || ||||| || | ||| || || Sbjct 89151 CTGCGAATATTCTGGATAGAGCC-------ATCCTCAGCGATG-ATGCGGTTCTTCAGGT 89100 Query 212863 CCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGA 212922 |||| ||| || || | | |||| ||||| ||| || ||||| | |||| Sbjct 89099 CCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAACTTGGA 89040 Query 212923 AGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGT 212982 | || || | |||||| | | ||| || | ||| || || |||||||| | || ||||| Sbjct 89039 ACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGT 88980 Query 212983 TGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCC 213042 |||| ||||| ||||| | ||| ||| ||||||||||| |||| || | ||||| | Sbjct 88979 TGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGC 88920 Query 213043 TCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGG 213101 || ||||||| ||| ||| ||| | |||||||||| |||| | Sbjct 88919 GGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGT-CCCAGTCCCAGAGATCAGAGGG- 88862 Query 213102 TCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCC 213161 || | | || |||||||||||| |||||| ||| || | | ||||| ||| Sbjct 88861 --CTTGACATT---GTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCC 88807 Query 213162 TGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCG 213221 | ||| || ||||||||||||| ||||||| | || || || || ||||| ||| Sbjct 88806 TCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCG 88747 Query 213222 TAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGC 213281 | ||||||||| || || |||| | |||| |||| ||||| || ||| ||| ||| Sbjct 88746 TGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGC 88687 Query 213282 ATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGT 213341 || | | ||| |||| ||||| |||||||| || | ||| || || | ||| Sbjct 88686 ATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGG 88627 Query 213342 CTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401 | || ||| |||| | |||| | || || |||| |||||||||||||| Sbjct 88626 CGCATGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTC 88567 Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG---TGATTGAACACGTAG 213458 |||||||| | | || | |||||| | | ||| ||| | | || | | | | Sbjct 88566 AGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATAGCGCTCATT- 88508 Query 213459 CCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 | ||| | || |||| ||||||||||| ||||||||||| || || ||||| Sbjct 88507 --CTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCG 88450 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | || | | ||||| |||||||| ||||| |||||| || || |||||||| ||| Sbjct 88449 TCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGG 88390 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| ||| |||||| ||||||||| | |||| ||||| || ||| Sbjct 88389 TTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTC 88330 Query 213639 TCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696 || || | | | || || ||| |||||| | | ||||| | | || Sbjct 88329 TCGGTTTGAGCCTCGAGGAT--GGCATACCAGAGCTTCTGCGCCTTCAGG----GTCTTT 88276 Query 213697 CAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755 || || | | || |||||||| ||||| || | | ||| || | ||| || Sbjct 88275 TGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAG 88216 Query 213756 CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGAC 213814 | | || || || || ||| ||||| || ||||||| |||| | |||| || Sbjct 88215 TCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCC-AC 88157 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || |||||| || ||||||| ||| || || ||| ||||| | | | ||| Sbjct 88156 ACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTC 88097 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| ||| ||| || ||||| || || || || |||| || |||||||| ||||| Sbjct 88096 TTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTC 88037 Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991 || |||||||||||| || || | || | ||||| ||||| || || | ||| Sbjct 88036 CAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGT 87977 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 ||||||||| |||| | || | | || |||||| |||||||| || || || Sbjct 87976 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 87917 Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACT 214107 || ||||||| ||| | || ||| |||| ||| || ||||| || || || Sbjct 87916 GTAGGAGCCGGTGGCAC---GGATGC-GGTGGACGTTGAGACCAATGCCTCCAGCCATCT 87861 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 ||||||||||||| ||| | ||| || || |||||| | |||||||| || | | Sbjct 87860 TGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCA 87801 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTG 214226 || | | |||||| ||| | || | ||||| | || ||| | ||||| ||||| Sbjct 87800 TGTCAACGAGGAAGCACGACGACAACT-GCGCCTGAGGCGTGCCGGCATTGAACAGCGTT 87742 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 || || || | | |||||||| || | | |||||||||| || || | Sbjct 87741 GGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCG 87682 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATG 214346 |||| || | ||| | |||| | ||||||||||||||| |||| ||| | | Sbjct 87681 ATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACG 87622 Query 214347 GGT---CCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | || ||| | ||||| || || || ||||| || |||||||| |||||||| Sbjct 87621 ACTTTACCGTTGAG---TTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 87566 >seq1610 Length=70883 Score = 134 bits (148), Expect = 3e-26 Identities = 349/519 (67%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| |||||||| | | ||||||||||| Sbjct 62469 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTC 62410 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||| ||||| | | || || | | | || ||| | | || | Sbjct 62409 CATGAAGTCGAAAGGGTTAGTAGACTTGTAGATCT-TCTCGTTGCCGAGAGCGACGAGGA 62351 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| | |||||||| | ||| | | || |||||||| | |||| Sbjct 62350 GACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGTAGGG 62291 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| |||||| |||| || || ||||||||||| || || || || | || Sbjct 62290 -CACAGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATG 62232 Query 48077 TGCTTA-ACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||| ||||| || ||| || | ||||| |||||| || | | |||| ||| Sbjct 62231 -GCTTCCACGCGCTGCTTGCTGGGGCGGTTGTT---CAGGTG--TGAGA-ACAGCAAGCA 62179 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||| ||||| |||||| || ||||| || |||||| ||||||||||| || || Sbjct 62178 GGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCC 62119 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 |||||| | || | || || |||||||| || | ||||||| |||| |||||| || Sbjct 62118 AGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAAT 62059 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || || || || || || || || | || || | | || | ||| ||| Sbjct 62058 ACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCACGGTCCTGGAT 61999 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||| || |||||||| |||||||| |||||| || Sbjct 61998 CCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGG 61960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931502827932160