Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq17 232 1e-55 seq1610 104 4e-17 >seq17 Length=201905 Score = 232 bits (256), Expect = 1e-55 Identities = 805/1229 (66%), Gaps = 48/1229 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||| ||||||||||||||||| |||||| |||||| || ||| | ||||| || Sbjct 88758 GTGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG-CTCACGAGCCTCAGG 88700 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 || ||| ||||| || || | ||||| | |||||||| ||||| || || | | Sbjct 88699 TGACTCGAAAGGCATGCGGAGGGCCAAGAAAG-CATCGGCCAGACCCTGGACGCCCACGC 88641 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 | || || | ||| | | ||||| |||| || || || || ||||| ||||| Sbjct 88640 CAATAGGACGGTGGCGCATGTTGCTCTTGCGG--GCCTCCGGAACAGGATAGTGGTTGAT 88583 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 ||||| | ||||| ||||| || || ||| | || ||| |||| |||| Sbjct 88582 ATCGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAA 88523 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 || | | | ||| ||| || || | || || ||||| | Sbjct 88522 GTT--ATAGCG-CTCATTCTCGTAGTCGACGA-----ACTGTGGC----AGGGCGATAGA 88475 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||||||| || || || |||||||| | ||||| |||||||| || || || Sbjct 88474 CGCCAGGTTGCAGACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAG 88415 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||| || ||||| || |||| || || || |||||| ||||| ||||| Sbjct 88414 GTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTT 88355 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| | ||| ||||| ||| ||||| |||||| | || || | |||||| | Sbjct 88354 GTACAACATGAAGGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCT- 88296 Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950 |||| || ||| ||| | ||| | || ||||||| || | | | || || ||||| Sbjct 88295 TCTGCGCCTTCAGGGTCTT-TTGGCCGCGACCCTCGCGCTCGTACTTCTCG-TACAGAGC 88238 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010 | | |||| || ||||| ||| | ||||| || ||| | ||| ||||||||| Sbjct 88237 CT--CGAACTCCTCGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGA 88180 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 |||||| ||| | | || | || ||||||||| ||||||||||| || || | Sbjct 88179 GTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGG 88120 Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 ||||| || | | || ||| ||| |||| ||| |||| ||| || | ||||| Sbjct 88119 AAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCG 88060 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || | ||||||||||| |||||||| |||| ||| | ||| ||||| ||||| |||||| Sbjct 88059 AAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCA 88000 Query 222191 CCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 |||||||| || ||| ||| | |||||||| || | | || | | || | Sbjct 87999 CCCTGATCGACGTATC--GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCAT 87942 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC- 222307 |||| ||||||||||| ||||| | ||| ||| | || | | || ||| Sbjct 87941 TGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCAC---GGATGC-GGTGGACG 87886 Query 222308 ---ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364 | || || || || || || ||||||||||| ||| |||| || || || | Sbjct 87885 TTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAG 87826 Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424 |||||||| || ||||||||| | || | || || || ||||||| ||| | | Sbjct 87825 ATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGA 87766 Query 222425 GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGA 222484 | | | ||| || |||||||| || |||||||| ||| | | ||||| Sbjct 87765 GGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAG 87706 Query 222485 TCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATG 222544 | ||| ||||| | || || ||||||||||||| || | ||| | ||| Sbjct 87705 TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATC 87646 Query 222545 TACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTT 222600 ||||| ||| |||| ||| || ||| || | ||| | ||| || ||||| Sbjct 87645 AGCATGTGCTGTGGCCGCTCGAC--GACTTTACCGTTGAGTT--TGAGGAGATACGAACG 87590 Query 222601 TTCCAGAGTCTTGAACCCAAAGTAGTTGA 222629 || || |||||||| |||||||| |||| Sbjct 87589 CTCGAGGGTCTTGAAGCCAAAGTA-TTGA 87562 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 221069 TCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGA----CCATGTGCTTGTTCACCAC 221124 || || | ||| ||||| | || |||| |||||| ||||| | ||| || || Sbjct 89100 TCCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATG-GATTG---ACAAC 89045 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 |||||| || || | |||||| | | ||| || | ||| || || | || || | || Sbjct 89044 TTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCA 88985 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||||||||| | || ||| ||||||||||| |||| || || || Sbjct 88984 CTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCT 88925 Query 221245 GTTGCG 221250 |||||| Sbjct 88924 GTTGCG 88919 >seq1610 Length=70883 Score = 104 bits (114), Expect = 4e-17 Identities = 287/446 (64%), Gaps = 5/446 (1%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || || ||||||||||| || || || || ||||| || | || || ||| Sbjct 62027 AGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTCGCTTCCA 62086 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 |||||||||| ||| || || ||||| || ||| ||| |||||||| |||||| Sbjct 62087 TCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCT 62146 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | ||||||||||| |||| || || |||||| |||| | | | ||| || | Sbjct 62147 CTCGTGACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTC---ACACCTGAACA 62203 Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || |||| || ||| | ||||| | || ||||| | || |||||| Sbjct 62204 AC-CGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAG 62262 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | |||||||| || | |||| Sbjct 62263 GAGTTCCTGACCGAGGCCTTGCCCTGTGCCCTACTCGGCATGAATGCCAACTTGATGAAG 62322 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235 || ||||| || | || ||||||| ||| || | || || || | ||||| Sbjct 62323 CAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATCTAC 62382 Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295 | | ||||||| |||||||| ||||| ||||| || | | ||||||||||||||| Sbjct 62383 AAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGGAAGACCAACTTC 62442 Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321 || || ||| | || || ||||| || Sbjct 62443 TTCGAGAAGCGTGTTGGTGACTACCA 62468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928814914418560