Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq17 145 1e-28 seq1638 132 8e-25 seq1675 116 6e-20 seq1610 111 2e-18 seq272 102 1e-15 >seq17 Length=201905 Score = 145 bits (160), Expect = 1e-28 Identities = 268/393 (68%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| || || || |||| ||| ||||| || | ||| || | | ||| ||||| Sbjct 87997 CTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGA 87938 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||||||||| || | ||||| ||| | ||| || | ||| || | || Sbjct 87937 CGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACC 87878 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||| || ||| ||||||||| | || || | ||||| || || ||||||||||| Sbjct 87877 AATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTC 87818 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||||||||| |||| | | |||||| Sbjct 87817 AATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCC 87758 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||||||||| ||||| |||| ||| ||| | ||| | ||||||| | |||||| Sbjct 87757 GGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGT 87698 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | || || | | | | | || ||| ||| || ||| | ||||| Sbjct 87697 CTCAAGAACCCTCTCGA-----TGTT----GTC------CCCCCAGATGCCAACAGCGAC 87653 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGAC 2073932 ||||| | ||||| ||| || ||||||||||| Sbjct 87652 ACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 87620 Score = 118 bits (130), Expect = 2e-20 Identities = 288/439 (66%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 2071570 GAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCT 2071627 ||| ||| || || ||| ||||| ||||||| | || ||||||| ||||||| || Sbjct 88440 GAATACTCGATGATCTCAGTGCAAAGGTTGGAG--CTGCGAATGGTGCCAAGGTTCTTCT 88383 Query 2071628 GGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCT 2071687 ||||||| | ||||| || ||||||| || |||| |||| || |||||| | | Sbjct 88382 GGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTT 88323 Query 2071688 GCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCG---CGCGGC 2071744 | ||| || |||||| |||| | | |||| || |||| | |||| | Sbjct 88322 GAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAG---GGTCTTTTGGCCGCGAC 88266 Query 2071745 CCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGC 2071804 ||| | || || || || | |||||| ||| ||| |||| Sbjct 88265 CCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGC 88206 Query 2071805 CGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAA 2071864 |||| |||| ||||| | || | |||||||||| || |||| || ||| | Sbjct 88205 CGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGA 88146 Query 2071865 ACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGT 2071924 | || || |||| ||| | ||||| || || || ||| ||| ||||| |||| Sbjct 88145 AGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGT 88086 Query 2071925 GGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGG 2071984 ||||||| ||||||||| | |||| || || |||||||| |||||||||||| || Sbjct 88085 GGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGG 88026 Query 2071985 CAAAGGCGCCCTTGCGCTT 2072003 |||| || || |||||| Sbjct 88025 CAAAAGCACCGGGGCGCTT 88007 Score = 116 bits (128), Expect = 6e-20 Identities = 356/544 (65%), Gaps = 26/544 (5%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGAT-GGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCC 2069309 |||||||| || ||||| || |||| || || | | | | ||||| || ||||||||||| Sbjct 89400 TGGTCGACTGTGAACTGAATCGGCGCTGCCG-CTGCCTGTGTGCGGAGGTAGTACATGCC 89342 Query 2069310 GGTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGG 2069369 |||||||| || | ||| || | |||||| ||||| || | | | | Sbjct 89341 AGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGAT---CTTGCCCATAG- 89286 Query 2069370 GACGGCACA-----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCG 2069424 | ||| || || | ||| ||||||||| |||||||| ||| | || ||| Sbjct 89285 -AAGGCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCG 89227 Query 2069425 GCCGCCATGT---CGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCC 2069481 || ||||| | |||||||| | | || | |||||| ||||||||| | |||||| Sbjct 89226 GCAGCCATCTGCACGATGGTC---CTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCC 89170 Query 2069482 TTGAGATGCGGCGGCACCTCGTCGTCATCAAAGCC-CTGCACCGAGCCCTGCGCTGCGAT 2069540 |||| | || || | | | || ||| | ||||| | | | ||||| Sbjct 89169 TTGATGT-------CATCTGGGATGCTGCGAATATTCTGGATAGAGCCATCCTCAGCGAT 89117 Query 2069541 GAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTG 2069600 || ||||| | ||| | |||||| || | | || || || || ||| Sbjct 89116 GATGCGGTTCTTCAGGTCCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCA 89057 Query 2069601 GCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGAT 2069660 | ||||| || || ||||| | ||||||||||||| ||||||||| || Sbjct 89056 TGGATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATA 88997 Query 2069661 GACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC 2069720 | ||| | |||| ||||||||||||||||||| |||| ||| ||||||||| |||| Sbjct 88996 GGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGC 88937 Query 2069721 CACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 || | || |||||| | |||| ||| | | ||| || |||||||||||| Sbjct 88936 CATCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTC 88877 Query 2069781 CCAG 2069784 |||| Sbjct 88876 CCAG 88873 >seq1638 Length=478393 Score = 132 bits (146), Expect = 8e-25 Identities = 274/405 (68%), Gaps = 2/405 (0%) Strand=Plus/Plus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || |||| || |||||||| | ||||| || || || ||||||| | || | | Sbjct 417229 GGGTCGAGAAATACCGCCCCGTCTTCCTCGATGATATAGTCGGCAACGTCGAGACCATCG 417288 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 |||||| | ||| |||||||| |||||| || || | | | || || Sbjct 417289 AGCGGCTCAAGATCATCGCCAAGGACGGCAATATGCCCCACGTCATTATCTCCGGGATGC 417348 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099 | || | |||||||| || | ||||||||||||| ||| | || | || Sbjct 417349 CAGGTATCGGCAAGACGACCTCGGTGCTGTGCCTGGCGCGCCAGCTGCTCGGTGATGCGT 417408 Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159 | | ||||| || ||||| || ||||| ||||| |||||||| | ||||||||||| | Sbjct 417409 ACAAGGAGGCGGTCCTCGAGCTGAATGCCTCAGATGAGCGCGGAATCGACGTCGTGCGCA 417468 Query 2019160 GAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219 ||||||| | ||| ||| | || ||||||| | |||||||||||| | Sbjct 417469 ACCGCATCAAGGGTTTCGCACAGAAGAAGGTCACCCTGCCGGCGGGCCGCCACAAGATCG 417528 Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACG-TCGGCGGCCCAGCAGGCCCTCCGATCGACC 2019278 ||||||| |||||||||||| || | ||| |||| || |||||||| || || ||| Sbjct 417529 TCATCCTTGATGAGGCCGACAGCATGACGAGCGGC-GCGCAGCAGGCACTGCGGCGGACA 417587 Query 2019279 ATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 ||||| | ||| | || || ||||| || || | || || ||| Sbjct 417588 ATGGAGATCTACTCGAATACCACGCGCTTCGCCTTCGCATGTAAC 417632 >seq1675 Length=100054 Score = 116 bits (128), Expect = 6e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | || || ||| | ||||| || ||||||||| | ||||||||| Sbjct 23742 AGGTCGACCAGGAGATGCTTTTCGAGATCATCCTGGCTGCCAACTACATGGACATCAAGG 23683 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 ||||||| || | || |||||||| || |||||| | || ||||||||||| || |||| Sbjct 23682 CCCTCCTTGACGTTGGCTGCAAGACTGTCGCCAACATGATTAAGGGCAAGTCTCCAGAGG 23623 Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753 | || |||||||| || ||||| Sbjct 23622 AGATTCGCAAGACTTTCAACAT 23601 >seq1610 Length=70883 Score = 111 bits (122), Expect = 2e-18 Identities = 177/252 (70%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| || | | Sbjct 62482 TGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAA 62423 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||| | | | |||| ||||||| |||| Sbjct 62422 GGGAGATGTTCTCCATGAAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGA 62363 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | ||||| || || ||||||||||||||||| |||||||| ||| | | ||| || Sbjct 62362 GAGCGACG--AGGAGACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATT 62305 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || || ||||| | |||| | | ||||| ||||| || | || || Sbjct 62304 CATGCCGAGTAGGGCACAGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGC 62245 Query 794129 CTCGATGATGAT 794140 ||| | ||||| Sbjct 62244 ATCGGTAATGAT 62233 >seq272 Length=19101 Score = 102 bits (112), Expect = 1e-15 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC-GCCAGGCGGCCGG 1485604 ||||||||||||||||| | ||| ||| ||| || || || ||||| || || Sbjct 15286 GGTCTGGATCTCGCGGGAGGAGATGGTGGACTTCTTATT-GTAGGCAGCCAGCTTGCTGG 15228 Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664 |||| ||| ||| || || | ||||||||||| |||||||||| ||| ||||| | Sbjct 15227 CCTCAGTGGCGACACGCTCAAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCAC 15168 Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| || ||||||||| ||||||||||| || Sbjct 15167 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 15128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915972591879986