Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq5 104 2e-17
seq1883 95.1 9e-15
>seq5
Length=272196
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| |||| || || ||||| || || || |||||||| || | | ||| ||
Sbjct 174147 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTACGGCCG 174206
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || |||||||| | |||| | || || || || ||||||||||| |||
Sbjct 174207 TCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTG 174266
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || |||||| | || | ||||| ||| || || ||||| || |||
Sbjct 174267 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 174326
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || || || ||||||||
Sbjct 174327 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 174361
>seq1883
Length=75506
Score = 95.1 bits (104), Expect = 9e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616
|| || || | || |||||||||||| || ||||| || || || |||||||| || ||
Sbjct 35175 TGCCCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCA 35234
Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676
| | || || || || || || ||||| ||| | || | | ||||| || ||
Sbjct 35235 GACAGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGG 35294
Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735
||||||||||| |||||||| ||| || | || || | || | ||||| || |||
Sbjct 35295 GGAATACCCTCCTTGTCTTG-AATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTC 35353
Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || ||||| || | ||| || || || || |||||
Sbjct 35354 CACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385207115432934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |