Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1883 134 3e-26 >seq1883 Length=75506 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || |||||||| || || || ||||| || || || ||||| Sbjct 35178 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 35237 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||||| || || || || |||||||| || | || || ||||| || Sbjct 35238 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGA 35297 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| ||||||||||| || || || || || ||||| || | ||| || Sbjct 35298 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTCCACC 35357 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||||||||| |||| ||||| || || || ||||| Sbjct 35358 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404 Score = 102 bits (112), Expect = 2e-16 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || || || || ||||| || || || || | Sbjct 35404 TACCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGG 35463 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||||| || || || ||||| || ||||| || | || ||||| |||| Sbjct 35464 ACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAG 35523 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| || || || || || || || || | || | Sbjct 35524 GGATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCA 35583 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || ||||||||||| || | ||||| || || |||||||| Sbjct 35584 CCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 35632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981794819952586