Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq17 372 3e-98 seq1883 138 1e-27 seq5 114 1e-20 seq9 93.3 4e-14 >seq17 Length=201905 Score = 372 bits (412), Expect = 3e-98 Identities = 972/1454 (67%), Gaps = 44/1454 (3%) Strand=Plus/Minus Query 148258 GATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACG 148317 |||| || || || |||||||| ||||||||||| ||| |||| | |||| ||| | | Sbjct 89054 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 88995 Query 148318 GTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTA 148377 | ||||| ||||||||||||||| ||||||| |||| || ||||||||| ||| | Sbjct 88994 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 88935 Query 148378 CCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCC 148437 || || |||||| | |||| | | || || ||| ||||| || ||||||||| Sbjct 88934 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 88875 Query 148438 AGAGCGGCGACGG--TGTCA-CGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGG 148494 |||| || || || || ||||||||||||||||||||| || || || ||| Sbjct 88874 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 88815 Query 148495 GGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGA 148554 | |||||||| || ||| || || | || || | || || || || Sbjct 88814 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 88755 Query 148555 GCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTC-GCT- 148612 | ||| ||| ||| || |||||| || ||| |||| |||| | | ||| | | Sbjct 88754 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT---CAGCTCACGAGCCTCAGGTG 88698 Query 148613 -TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAA 148671 ||| | ||||| || || || || || ||||| || ||||| ||||||||||||| Sbjct 88697 ACTCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAA 88638 Query 148672 TGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCG 148730 | || ||||| |||||| ||| || ||| || | |||||||||||| ||| Sbjct 88637 TAGGACGGTGGCGCATGTTGCTCTTGCGGGC-CTCCGGAACAGGATAGTGGTTGATATCG 88579 Query 148731 ATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAA---A 148787 |||||||||| || ||||| || || |||| || | | | ||||||| | || | Sbjct 88578 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTA 88519 Query 148788 TCG---TACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACG 148844 | | | || || | ||| | | | || ||||||||| || || ||||| || Sbjct 88518 TAGCGCTCATTCTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 88459 Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT---GCTGCATTTG 148901 || ||| || || || ||||| | |||||| | ||| || || ||||| || Sbjct 88458 GCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 88399 Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG-TCCTTGTACAGCATGTA 148960 | ||| | |||||| || |||||||||| |||| || | |||||||||| |||| | Sbjct 88398 GT---GCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-GCGTGATCCTTGTACAACATGAA 88343 Query 148961 CGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGC 149018 || ||| || || || | || | ||| | | | || | |||||| | Sbjct 88342 GGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCA--GAGCTTCTGCGCCTTC 88285 Query 149019 ACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCT 149076 | || | | ||||||||| ||||||| | ||| | ||| ||||||| ||| Sbjct 88284 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGC--CTCGAACTCCT 88227 Query 149077 CGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGT 149136 |||||||||| ||| | || |||||||||| || |||||||| || | ||| |||||| Sbjct 88226 CGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGT 88167 Query 149137 CCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCG 149196 | | ||| |||||||| || ||||| || | |||||| || | |||||| || | Sbjct 88166 TCTTCTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAG 88107 Query 149197 CCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGT 149256 | | ||||| || ||| ||||||| ||| | ||| | || |||| Sbjct 88106 CACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGT 88047 Query 149257 GCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGT 149313 |||| ||||| | ||| | || | || || |||| ||||| ||||| ||||||| Sbjct 88046 GCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGT 87987 Query 149314 GGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAG 149373 || | ||||||| || || || | |||||| |||||| ||| |||||||| | Sbjct 87986 ATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGG 87927 Query 149374 T-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC- 149431 | ||| ||| |||| || || | ||| ||||||| || ||||| || Sbjct 87926 TGCCAGC-GATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCA 87868 Query 149432 GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGT 149490 ||| | ||| ||||| || || ||| | || || ||||||||||| ||||||| Sbjct 87867 GCCAT-CTTGGAGATCATGGCACAGGTCTTC-AGGGTATCATAGATGCCCTCAATGCTGT 87810 Query 149491 CGCGCTTCATGGTCAGC-AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCG 149549 | |||||| |||| | || |||||||| ||| |||| | |||||||||| | Sbjct 87809 CCTCCTTCAT-GTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTG 87751 Query 149550 AACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGC 149609 |||| || || |||||||| || | || | | ||| | ||| | ||| || Sbjct 87750 AACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGA 87691 Query 149610 ACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGT 149669 || | || |||| || || |||||| | ||||| ||||||||||| ||||| || Sbjct 87690 ACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGC 87631 Query 149670 CGCTCCGCCACTTT 149683 ||||| | ||||| Sbjct 87630 CGCTCGACGACTTT 87617 >seq1883 Length=75506 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | ||||||||||||||||| Sbjct 35664 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 35722 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||||||||| |||||||| |||||| ||| Sbjct 35723 AGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 35782 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | || ||| || || | |||| ||| |||||||| || || Sbjct 35783 GACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGT 35842 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 35843 CTTGACGAAGATCTGCAT 35860 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || || ||| || || || || |||||||||| Sbjct 35208 GTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCG--TCTTCCAGCTGCTTGC 35265 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| | || || ||||||||||| || || || || |||||||| ||||| || Sbjct 35266 CCGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTGGCCT 35325 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||||| |||| ||||| || ||||| ||||| | Sbjct 35326 TCACGTTGTCGATCGTGTCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGG 35385 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 35386 TCTTGACGAAGATTTGCAT 35404 >seq5 Length=272196 Score = 114 bits (126), Expect = 1e-20 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || || ||| | || ||| |||||||||||||||| Sbjct 174164 GGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 174221 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| ||||| || || || || |||||||| |||||| | Sbjct 174222 CCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCC 174281 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| | |||||| || | ||||| || ||||| || || Sbjct 174282 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGG 174341 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 174342 GTCTTGACGAAGATCTGCATG 174362 >seq9 Length=228969 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || | ||||| || || |||||||| || |||||| Sbjct 118330 TCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGGATACCCTCCTTG 118389 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| || | ||||| Sbjct 118390 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 118449 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || || || |||||||| || ||||| Sbjct 118450 GTCTTACCCGTCAGAGTCTTCACGAA 118475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405245935760