Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1883 96.9 8e-15 >seq1883 Length=75506 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || |||||||| | || ||||| || ||| Sbjct 35629 CAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGAC 35570 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || ||||| || Sbjct 35569 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAGCAG 35510 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || || || | ||| || |||| |||||| || Sbjct 35509 CGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAACATC 35450 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || |||||||| Sbjct 35449 CAGAAGGAGTCCACGCTCCACCTTGT 35424 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || |||||||| | || |||||| || ||||| |||| Sbjct 35390 CAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCGGACACGATCGACAA 35331 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || || || ||| || ||| || | |||||||| Sbjct 35330 CGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTTATCTT 35271 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| ||||||| || |||| || | || |||||| | ||||| ||||| Sbjct 35270 TGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAACATTCAGAAGGAGTC 35211 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 35210 GACGCTGCAC 35201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181781824288654