Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq17 219 4e-52
seq1883 84.2 2e-11
>seq17
Length=201905
Score = 219 bits (242), Expect = 4e-52
Identities = 960/1501 (64%), Gaps = 30/1501 (2%)
Strand=Plus/Minus
Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950
||||||| ||||| |||||||| || ||||| || | |||| | ||| || | |
Sbjct 89054 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 88995
Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010
||||||| |||| || ||||| | || || | || | || || |||||| |||||
Sbjct 88994 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 88935
Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCC 147070
|||||| || || | ||||| | ||| ||| ||||||| | | ||||||||
Sbjct 88934 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 88875
Query 147071 ACATCGACGAGGGCGTCAC---GTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127
| | |||||| | || |||||||||||||||||| || | || | | |||
Sbjct 88874 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 88815
Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187
|| || || | | | |||| || || || || | ||||| ||| ||
Sbjct 88814 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 88755
Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247
| || | | ||| ||||| ||| ||| || ||||| || | || || ||
Sbjct 88754 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACT 88695
Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307
|| ||||||| || || || || |||||||||| |||||||| || ||||| ||||
Sbjct 88694 CGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAG 88635
Query 147308 GTCGATGCTTTTCGTTGCTGCGCTT-CGCGCT--CGCTATGGGATAGTGGTTGCGATCAA 147364
| || || |||||| ||| || || || | |||||||||||| ||| |
Sbjct 88634 GACGGTGGCGCATGTTGCT---CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 88578
Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424
| |||||||| ||||| || || || || | || | | | || || ||| | ||
Sbjct 88577 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTAT 88518
Query 147425 AAGTCCCGTCTTCG-ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483
| | | | ||| | || ||| | || || ||||||||||||||| ||||||||
Sbjct 88517 AGCGCTCATTCTCGTAGTCG-ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 88459
Query 147484 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATG 147543
|| ||| || | | |||| | ||| || | ||| |||||| || |||
Sbjct 88458 GCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 88399
Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG-TCTTTGAAGAGCATGTACGG 147602
|| | || | ||| ||||| || || ||| || | || ||| | | |||| | ||
Sbjct 88398 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAGGG 88340
Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCAC 147659
||| |||||| ||| | || | ||| | ||| || | |||||| ||
Sbjct 88339 GTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTCAG 88283
Query 147660 CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCC 147719
|| | ||| |||||| |||||| |||||||| ||| ||||| |||||
Sbjct 88282 GGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 88223
Query 147720 GTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGC 147779
|||||| |||||||||||||| |||| | || |||||||| | ||| | ||| |
Sbjct 88222 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 88163
Query 147780 GTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTT 147839
| || || ||| || |||||||| | ||| || || | || || || ||
Sbjct 88162 CTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 88103
Query 147840 GCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGTGCC 147898
| || || || ||| || | || | | | | ||| || |||||||
Sbjct 88102 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATCAGCGTGCC 88044
Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGC 147955
| || || | ||||| ||| | ||||| ||||| || ||||| ||||| | |
Sbjct 88043 ATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATC 87984
Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015
| | ||||||| || || |||| ||| || | ||| | | ||||||||||||
Sbjct 87983 GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGC 87924
Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCG 148074
| ||| | | |||| ||| || | ||| ||||| | |||||||| || |||
Sbjct 87923 CAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCA 87864
Query 148075 TACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132
| ||| || || || ||| | | || || |||||||| || |||||||| |
Sbjct 87863 T-CTTGGAGAT--CATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCT 87807
Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192
|| | | ||| | || ||||| ||| |||| |||| || || ||| |
Sbjct 87806 CCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACA 87747
Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252
| || || |||||| || || || || | ||| | || ||||||| | |
Sbjct 87746 GCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCC 87687
Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312
||||||| ||| || ||||| | ||||| ||||| |||||||||||||| || |
Sbjct 87686 TCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCT 87627
Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372
|| | |||| | ||||| ||||| ||||| | |||||||| ||| | |||||||
Sbjct 87626 CGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGT 87567
Query 148373 A 148373
|
Sbjct 87566 A 87566
>seq1883
Length=75506
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| || || || || || ||||| || ||||
Sbjct 35439 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCG 35498
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||| ||||| || || || || || || || ||||
Sbjct 35499 AAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACG 35558
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || |||| || |||||| |||| || | ||| || || || ||||| ||
Sbjct 35559 TTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTG 35618
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 35619 ACGAAGATCTGCAT 35632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476595865034640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |