Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq17 219 4e-52 seq1883 84.2 2e-11 >seq17 Length=201905 Score = 219 bits (242), Expect = 4e-52 Identities = 960/1501 (64%), Gaps = 30/1501 (2%) Strand=Plus/Minus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950 ||||||| ||||| |||||||| || ||||| || | |||| | ||| || | | Sbjct 89054 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 88995 Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010 ||||||| |||| || ||||| | || || | || | || || |||||| ||||| Sbjct 88994 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 88935 Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCC 147070 |||||| || || | ||||| | ||| ||| ||||||| | | |||||||| Sbjct 88934 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 88875 Query 147071 ACATCGACGAGGGCGTCAC---GTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127 | | |||||| | || |||||||||||||||||| || | || | | ||| Sbjct 88874 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 88815 Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187 || || || | | | |||| || || || || | ||||| ||| || Sbjct 88814 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 88755 Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247 | || | | ||| ||||| ||| ||| || ||||| || | || || || Sbjct 88754 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACT 88695 Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 || ||||||| || || || || |||||||||| |||||||| || ||||| |||| Sbjct 88694 CGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAG 88635 Query 147308 GTCGATGCTTTTCGTTGCTGCGCTT-CGCGCT--CGCTATGGGATAGTGGTTGCGATCAA 147364 | || || |||||| ||| || || || | |||||||||||| ||| | Sbjct 88634 GACGGTGGCGCATGTTGCT---CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 88578 Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424 | |||||||| ||||| || || || || | || | | | || || ||| | || Sbjct 88577 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTAT 88518 Query 147425 AAGTCCCGTCTTCG-ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 | | | | ||| | || ||| | || || ||||||||||||||| |||||||| Sbjct 88517 AGCGCTCATTCTCGTAGTCG-ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 88459 Query 147484 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATG 147543 || ||| || | | |||| | ||| || | ||| |||||| || ||| Sbjct 88458 GCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 88399 Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG-TCTTTGAAGAGCATGTACGG 147602 || | || | ||| ||||| || || ||| || | || ||| | | |||| | || Sbjct 88398 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAGGG 88340 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCAC 147659 ||| |||||| ||| | || | ||| | ||| || | |||||| || Sbjct 88339 GTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTCAG 88283 Query 147660 CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCC 147719 || | ||| |||||| |||||| |||||||| ||| ||||| ||||| Sbjct 88282 GGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 88223 Query 147720 GTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGC 147779 |||||| |||||||||||||| |||| | || |||||||| | ||| | ||| | Sbjct 88222 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 88163 Query 147780 GTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTT 147839 | || || ||| || |||||||| | ||| || || | || || || || Sbjct 88162 CTCCACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 88103 Query 147840 GCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGTGCC 147898 | || || || ||| || | || | | | | ||| || ||||||| Sbjct 88102 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATCAGCGTGCC 88044 Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGC 147955 | || || | ||||| ||| | ||||| ||||| || ||||| ||||| | | Sbjct 88043 ATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATC 87984 Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015 | | ||||||| || || |||| ||| || | ||| | | |||||||||||| Sbjct 87983 GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGC 87924 Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCG 148074 | ||| | | |||| ||| || | ||| ||||| | |||||||| || ||| Sbjct 87923 CAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCA 87864 Query 148075 TACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 | ||| || || || ||| | | || || |||||||| || |||||||| | Sbjct 87863 T-CTTGGAGAT--CATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCT 87807 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | ||| | || ||||| ||| |||| |||| || || ||| | Sbjct 87806 CCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACA 87747 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252 | || || |||||| || || || || | ||| | || ||||||| | | Sbjct 87746 GCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCC 87687 Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312 ||||||| ||| || ||||| | ||||| ||||| |||||||||||||| || | Sbjct 87686 TCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCT 87627 Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372 || | |||| | ||||| ||||| ||||| | |||||||| ||| | ||||||| Sbjct 87626 CGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGT 87567 Query 148373 A 148373 | Sbjct 87566 A 87566 >seq1883 Length=75506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || || || || || ||||| || |||| Sbjct 35439 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCG 35498 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| ||||| || || || || || || || |||| Sbjct 35499 AAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACG 35558 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| || |||||| |||| || | ||| || || || ||||| || Sbjct 35559 TTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTG 35618 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 35619 ACGAAGATCTGCAT 35632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476595865034640