Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq229 143 3e-29
>seq229
Length=27093
Score = 143 bits (158), Expect = 3e-29
Identities = 278/405 (69%), Gaps = 4/405 (1%)
Strand=Plus/Minus
Query 147102 GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCG 147160
|| |||||| ||||| ||| | |||||||||||||||||||||||| |||||||
Sbjct 20129 GGACACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCT 20071
Query 147161 CGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGA 147220
||||||||| || | | | ||||| | | |||||| || | || | |
Sbjct 20070 TGGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCA 20011
Query 147221 TAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGC-AGTCCACGTAC 147279
||| | ||||||||| ||||||||||| |||||| | | ||| ||| ||||||
Sbjct 20010 CGACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCG-CGCGCGCGTCGACGTAC 19952
Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339
||| || ||||||| ||||||||| |||||||| || || |||||||| || | |
Sbjct 19951 TCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGG 19892
Query 147340 TGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399
|||| | |||| | | | || ||| || | || |||| | |||||||||| ||
Sbjct 19891 TGCGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 19832
Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459
|||| ||| |||| | || ||| | |||| | ||||||||| ||||| ||
Sbjct 19831 CCCTGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCC 19772
Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 147504
| ||| ||| || || | ||| || || ||||| ||| ||
Sbjct 19771 AGCACCGCCCGGTGGAACACGCGCTTCGTCGTGAGCAGCGGGTAC 19727
Score = 114 bits (126), Expect = 2e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985
|||||||||| | ||||||||||||||| |||| | |||| | | |||||
Sbjct 20389 TCCACGTGGTCCACGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACG 20330
Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045
||| | |||||| || | ||||| || ||||||| ||||||||| |||||||| ||
Sbjct 20329 AGGTCACACACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGC 20270
Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
|| || |||||||| || | |||| |||||||||||||||
Sbjct 20269 ACGCCGAGGCCCATATCGCAGGACCGCTGGTACAGCTGGCA 20229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583469226273600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |