Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq17 168 1e-35 seq1638 147 3e-29 seq1610 131 2e-24 >seq17 Length=201905 Score = 168 bits (186), Expect = 1e-35 Identities = 272/393 (69%), Gaps = 15/393 (4%) Strand=Plus/Plus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||||||||||||| ||| | ||||| ||||||||||| ||||| | ||| | | Sbjct 87620 GTCGTCGAGCGGCCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGG---GAC 87676 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909 || |||| | | || ||| |||||| | |||||| | |||| Sbjct 87677 AACATCGAGAGGGTTCTTGAG------------ACCTACAACTACATGTCCAACAAGTTC 87724 Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 ||||| ||| |||| ||||| || |||||||||||||| | ||||| |||||| Sbjct 87725 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 87784 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || | |||||||||| || || |||||||||||||| || || ||| Sbjct 87785 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 87844 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || | ||||||||| ||| || ||||| ||| | || ||| | || ||| Sbjct 87845 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAACGTCCACCGCATCCGTGCC 87904 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 | ||| ||||| | || |||||||||||| |||||| ||| | | || ||| | || Sbjct 87905 ACCGGCTCCTACATCGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTGCGT 87964 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || || ||| |||| || || |||||||| ||| Sbjct 87965 GTCTTCAACAACACTGCCCGATACGTCGATCAG 87997 Score = 116 bits (128), Expect = 5e-20 Identities = 356/542 (66%), Gaps = 20/542 (4%) Strand=Plus/Plus Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937 ||||||||||||||| || ||| | | ||||| || | |||||| ||| | Sbjct 88873 CTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAACAGCTTGTT 88932 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 |||||| ||||||||| ||| |||| ||||||||||||||||||| |||| || || Sbjct 88933 GATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACGAGTGCTTTGA 88992 Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 | | || ||||||||| ||||||||||||| | ||||| || || ||||| Sbjct 88993 GCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCCAAGTTGTCAA 89052 Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117 | ||| ||||| ||||| | | || |||||| | ||| | |||| Sbjct 89053 TCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGGTCTGAGGACCTGAAGAACCG 89112 Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177 |||| || | | ||||| | ||| || || || | | || || | Sbjct 89113 CATCATCGCTGAGGATGGCTCTATCCAGAATATT--CG--CAGCA--TCCCAGATGACAT 89166 Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGGC 263234 |||||| |||| ||||||||| |||||| | | | | |||||| | | ||||| Sbjct 89167 CAAGGCCCTCTACAAGACCGTCTGGGAGAT---CTCGCAGAGGACCATCGTGCAGATGGC 89223 Query 263235 GGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC- 263293 ||||| || | ||| |||||||| ||||||||| ||| | || | || | Sbjct 89224 TGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATACACATGCGTGAGCC 89283 Query 263294 --CGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351 | | || | || ||||| |||||| | | ||| | || |||||||| Sbjct 89284 TTCTATGGGCAAG---ATCACTAGCATGCACTTCACCGGTTGGAAGCTGGGTCTCAAGAC 89340 Query 263352 TGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCC-ATTCAATTCACCGTCGATC 263410 |||||||||||| || ||||| | | | || | || |||| ||||| ||||| ||||| | Sbjct 89341 TGGCATGTACTACCTCCGCACACAGGCAGC-GGCAGCGCCGATTCAGTTCACAGTCGACC 89399 Query 263411 AG 263412 || Sbjct 89400 AG 89401 >seq1638 Length=478393 Score = 147 bits (162), Expect = 3e-29 Identities = 307/455 (67%), Gaps = 2/455 (0%) Strand=Plus/Minus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 ||||| || ||||| ||| ||||| | |||||||| | | ||| ||| || || Sbjct 417682 CGCAGTATCGCACACCGGGACTGCAATGGCTCGATGATCTTGTTGGACTGGTTACATGCG 417623 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 | ||| || ||||| ||||| | | | ||||| ||| ||| || ||||| || || Sbjct 417622 AAGGCGAAGCGCGTGGTATTCGAGTAGATCTCCATTGTCCGCCGCAGTGCCTGCTGCGC- 417564 Query 332996 GCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 |||| ||| | || ||||||||| || ||||||| |||||||||||| || |||||| Sbjct 417563 GCCGCTCGTCATGCTGTCGGCCTCATCAAGGATGACGATCTTGTGGCGGCCCGCCGGCAG 417504 Query 333055 ATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTC 333114 ||| | ||| ||| |||||| |||||||||||||| | |||||||| Sbjct 417503 GGTGACCTTCTTCTGTGCGAAACCCTTGATGCGGTTGCGCACGACGTCGATTCCGCGCTC 417444 Query 333115 GTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGC 333174 || || || || || ||||| || ||||| | | || |||| | || |||||| Sbjct 417443 ATCTGAGGCATTCAGCTCGAGGACCGCCTCCTTGTACGCATCACCGAGCAGCTGGCGCGC 417384 Query 333175 CAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGG 333234 ||||||| | || |||||||| | || ||| || | | | || || ||| Sbjct 417383 CAGGCACAGCACCGAGGTCGTCTTGCCGATACCTGGCATCCCGGAGATAATGACGTGGGG 417324 Query 333235 CATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAAT 333294 ||| |||||||| ||| | |||||| | | || | |||||||||| || Sbjct 417323 CATATTGCCGTCCTTGGCGATGATCTTGAGCCGCTCGATGGTCTCGACGTTGCCGACTAT 417264 Query 333295 GTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329 || ||||| | | |||||||| || |||| || Sbjct 417263 ATCATCGAGGAAGACGGGGCGGTATTTCTCGACCC 417229 >seq1610 Length=70883 Score = 131 bits (144), Expect = 2e-24 Identities = 234/336 (70%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||| |||||| ||||| |||||||| |||||| | |||| Sbjct 61566 GATTTGGCAAATGTAC-AAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACC 61624 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | ||| | | ||||| | ||| ||| |||||| | |||||| Sbjct 61625 TGTCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCT 61684 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||||||||| ||| ||||| || |||||||| ||| ||| || || Sbjct 61685 CCCACATCCTCGCCTTCTTT-GCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAG 61743 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| |||| || ||||| ||||||| | Sbjct 61744 CGCTTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATG 61803 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || ||||| |||||||| || || || ||||||| || Sbjct 61804 ATGGAGAACATCCACTCCGAGACTTACTCTCTCCTGATTGATACATATATCAAGGAGCCT 61863 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 | | || | ||| ||||||| |||||| || || Sbjct 61864 GCCCAG-CGCACCTACCTCTTCAACGCCATTGAGAC 61898 Score = 93.3 bits (102), Expect = 6e-13 Identities = 179/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||| || || | || ||||| ||||| | | |||| | |||| || Sbjct 62233 ATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCCTGTGCC 62292 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||| |||| | | ||| |||||||| ||||| ||||||||||| | Sbjct 62293 CTACTCGGCATGAATGCCAACT-TGATGAAGCAGTACATCGAATTC-GTCGCCGACCGTC 62350 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| || ||||| |||| | | | ||||| ||| | ||| Sbjct 62351 TCCTCGTCGCTCTCGGCAACG-AGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATG 62409 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| || | || ||||||||||| |||||| || | ||| || ||| Sbjct 62410 GAGAACATCTCCCTTGGCGGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 62469 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 62470 AAGGCTGGTGTCATGGCCA 62488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177562932968988