Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq17 242 5e-59
>seq17
Length=201905
Score = 242 bits (268), Expect = 5e-59
Identities = 1139/1779 (64%), Gaps = 46/1779 (3%)
Strand=Plus/Minus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
|||||||||| || || |||| || ||||| |||||||| || |||||||| |
Sbjct 89390 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 89331
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449
| | ||||| || | ||||| || || |||| ||| | || || | ||||
Sbjct 89330 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 89272
Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507
| ||||| ||| |||| |||| |||||| || || | || ||||| | |
Sbjct 89271 TGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGCA 89214
Query 110508 TGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGA 110567
|| | || | || ||||| || || ||||| |||||| ||||||||||
Sbjct 89213 CGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGA 89154
Query 110568 TATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626
| ||| || |||||||||| || || || | | ||| | | ||||| ||||
Sbjct 89153 TG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCA 89095
Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTG--TTGACAATGACAAACT 110684
||||| |||||| || | || || |||| || | || ||||||| ||||
Sbjct 89094 GACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACT 89037
Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744
| || ||||| | | | | |||||||| | ||| || || |||||||| || || |
Sbjct 89036 CGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGT 88977
Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804
| |||| ||| || | || ||||| || ||||| || |||||||| | ||||| || |
Sbjct 88976 TGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGA 88917
Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTC 110862
||| | || |||||| |||| | | |||||||| || || | || ||
Sbjct 88916 CACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTTG 88858
Query 110863 ACCTTC--CCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920
|| || ||||||||| |||| || | || ||||| ||||||| ||||| | | |
Sbjct 88857 ACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGAT 88798
Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980
|||| || | | | || | ||||| || |||| ||||| || |||
Sbjct 88797 GAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATG 88738
Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGC 111035
|| || ||||| | |||| ||| || ||| ||| || || |||| ||
Sbjct 88737 GTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGG 88678
Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095
| || ||| |||| || ||||| || || |||| |||||||| | ||| ||||
Sbjct 88677 GCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA 88623
Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155
| || ||| || || | ||| ||||| || | || |||| ||| || |
Sbjct 88622 TGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGT 88563
Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTCT 111214
| || | || |||| ||| || || | | | | | | || | ||||
Sbjct 88562 TGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATA-GCGCTCATTCTCG 88504
Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274
| | ||| ||| ||| |||||||| || |||| ||||| ||||| ||| || |
Sbjct 88503 TAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCGTCAGGA 88444
Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334
| | ||||| | || || || || | |||||| || ||| || || | |||||
Sbjct 88443 GCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTC 88384
Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394
||||| ||||| |||| ||||||||| | |||| |||| | || ||||| ||
Sbjct 88383 TGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTT 88324
Query 111395 TGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGT 111451
|| | | ||| || || | ||| | | || ||| || || | | || |||| ||
Sbjct 88323 TGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCGA 88267
Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511
||||| ||||||||| ||| || || || |||||||| || ||||| ||
Sbjct 88266 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 88207
Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571
|| || || || || || | |||| ||| | || | ||| || |||||||||
Sbjct 88206 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATG 88147
Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACC 111630
|| || || || ||||| |||| ||||| || | | ||| || ||||||| | ||
Sbjct 88146 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTCC 88088
Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690
||||| || | || |||||||| | || ||| |||||||||||||| || ||||
Sbjct 88087 GTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGAT 88028
Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747
|| | || || || | ||| | |||| || || || || ||| ||| ||
Sbjct 88027 GGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAA 87968
Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805
|| || | ||| || || || |||| || || || || || ||| || |||
Sbjct 87967 GACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG-- 87910
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865
|||| | | |||| || | ||||| || |||||| ||| |||||
Sbjct 87909 CCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATG 87850
Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925
||||| | | || || ||||||| || | || ||||||||| || | | |||
Sbjct 87849 GCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGG 87790
Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985
||||| |||| ||||| || || || |||||||| || ||||| | |||||
Sbjct 87789 AAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGT 87730
Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044
|||| | || | | |||||| | || ||| ||||| | || || |||| |||||
Sbjct 87729 GTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCC 87671
Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|||||| | ||||| ||||| | ||||| ||||||
Sbjct 87670 CCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGG 87632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628011793070400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |