Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq17 242 5e-59 >seq17 Length=201905 Score = 242 bits (268), Expect = 5e-59 Identities = 1139/1779 (64%), Gaps = 46/1779 (3%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||| || || |||| || ||||| |||||||| || |||||||| | Sbjct 89390 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 89331 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| || || |||| ||| | || || | |||| Sbjct 89330 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 89272 Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507 | ||||| ||| |||| |||| |||||| || || | || ||||| | | Sbjct 89271 TGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGCA 89214 Query 110508 TGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGA 110567 || | || | || ||||| || || ||||| |||||| |||||||||| Sbjct 89213 CGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGA 89154 Query 110568 TATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626 | ||| || |||||||||| || || || | | ||| | | ||||| |||| Sbjct 89153 TG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCA 89095 Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTG--TTGACAATGACAAACT 110684 ||||| |||||| || | || || |||| || | || ||||||| |||| Sbjct 89094 GACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACT 89037 Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744 | || ||||| | | | | |||||||| | ||| || || |||||||| || || | Sbjct 89036 CGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGT 88977 Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804 | |||| ||| || | || ||||| || ||||| || |||||||| | ||||| || | Sbjct 88976 TGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGA 88917 Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTC 110862 ||| | || |||||| |||| | | |||||||| || || | || || Sbjct 88916 CACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTTG 88858 Query 110863 ACCTTC--CCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920 || || ||||||||| |||| || | || ||||| ||||||| ||||| | | | Sbjct 88857 ACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGAT 88798 Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980 |||| || | | | || | ||||| || |||| ||||| || ||| Sbjct 88797 GAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATG 88738 Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGC 111035 || || ||||| | |||| ||| || ||| ||| || || |||| || Sbjct 88737 GTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGG 88678 Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 | || ||| |||| || ||||| || || |||| |||||||| | ||| |||| Sbjct 88677 GCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA 88623 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | || ||| || || | ||| ||||| || | || |||| ||| || | Sbjct 88622 TGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGT 88563 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTCT 111214 | || | || |||| ||| || || | | | | | | || | |||| Sbjct 88562 TGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATA-GCGCTCATTCTCG 88504 Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274 | | ||| ||| ||| |||||||| || |||| ||||| ||||| ||| || | Sbjct 88503 TAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCGTCAGGA 88444 Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334 | | ||||| | || || || || | |||||| || ||| || || | ||||| Sbjct 88443 GCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTC 88384 Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394 ||||| ||||| |||| ||||||||| | |||| |||| | || ||||| || Sbjct 88383 TGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTT 88324 Query 111395 TGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGT 111451 || | | ||| || || | ||| | | || ||| || || | | || |||| || Sbjct 88323 TGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCGA 88267 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 ||||| ||||||||| ||| || || || |||||||| || ||||| || Sbjct 88266 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 88207 Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 || || || || || || | |||| ||| | || | ||| || ||||||||| Sbjct 88206 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATG 88147 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACC 111630 || || || || ||||| |||| ||||| || | | ||| || ||||||| | || Sbjct 88146 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTCC 88088 Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690 ||||| || | || |||||||| | || ||| |||||||||||||| || |||| Sbjct 88087 GTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGAT 88028 Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 || | || || || | ||| | |||| || || || || ||| ||| || Sbjct 88027 GGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAA 87968 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805 || || | ||| || || || |||| || || || || || ||| || ||| Sbjct 87967 GACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG-- 87910 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865 |||| | | |||| || | ||||| || |||||| ||| ||||| Sbjct 87909 CCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATG 87850 Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 ||||| | | || || ||||||| || | || ||||||||| || | | ||| Sbjct 87849 GCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGG 87790 Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985 ||||| |||| ||||| || || || |||||||| || ||||| | ||||| Sbjct 87789 AAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGT 87730 Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044 |||| | || | | |||||| | || ||| ||||| | || || |||| ||||| Sbjct 87729 GTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCC 87671 Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||||| | ||||| ||||| | ||||| |||||| Sbjct 87670 CCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGG 87632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628011793070400