Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq17 206 3e-48 seq1610 105 8e-18 >seq17 Length=201905 Score = 206 bits (228), Expect = 3e-48 Identities = 1132/1779 (64%), Gaps = 46/1779 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| || || | || || ||||| |||| || || Sbjct 87632 CCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGGGACAACATCGAGAGGGTT 87691 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | |||||| | | || | |||| ||||| | ||||| || || Sbjct 87692 CTTGAGACCTACAACTACATGTCCAACAAGT-TCTTCACACACGCGTCGCCAACGCTGTT 87750 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| || || || | || |||| |||||||| | | || |||||||| Sbjct 87751 CAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCGTGCTTCCTCGTTGACATGAAGGAGGA 87810 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | || ||||||| || || | | ||||| ||||| ||| |||||| Sbjct 87811 CAGCATTGAGGGCATCTATGATACCCTGAAGACCTGTGCCATGATCTCCAAGATGGCTGG 87870 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 || ||||| | || |||| | | |||| ||| || ||| || || Sbjct 87871 AGGCATTGGTCTCAACGTCCACCGCATCCGTGCCACCGG--CTCCTACATCGCTGGCACC 87928 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || || |||| || || || ||| | || || || ||| ||| || || || Sbjct 87929 AACGGCACGTCCAATGGCATCATCCCTATGTTGCGTGTCTTCAACAACACTGCCCGATAC 87988 Query 104579 GTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 || |||| | ||| | || || || | || |||| || |||||||||||| Sbjct 87989 GTCGATCAGGGTGGCAATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCATGGCAC 88048 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || ||| || | |||||||| || |||| ||||| || | || |||| | |||| Sbjct 88049 GCTGATGTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGG-TCCGTGC 88107 Query 104696 -CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 || || |||||| || |||||||| || ||||||||||||||| | || ||| ||| Sbjct 88108 TCGTGACCTCTTCCTTGCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTGGAGAAGAA 88167 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | ||| |||| | || || || || || || || |||| | || || Sbjct 88168 CGGCGACTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTGCTACGGCGA 88227 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGC 104873 |||||| || || || ||| ||||||||| || ||||| ||| | ||| || Sbjct 88228 GGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGCGAGGGTCGCGGCCA-AAAGACCCTG- 88285 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 || || || | | ||| | || || ||| || ||||||||||||| || | || | | Sbjct 88286 AAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAACCCCTTC 88345 Query 104933 ATGCTTTACAAAG---ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 ||| | ||||| | ||||| |||| ||||| || || ||||| | || || Sbjct 88346 ATGTTGTACAAGGATCACGCC---AACCGCAAGAGCAACCAGAAGAACCTTGGCACCATT 88402 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||| || || || || ||| | || | | | | || ||| ||||| Sbjct 88403 CGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGACGAGGTTGCTGTC 88462 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 105109 || ||||| || || ||||| || || ||| || || |||| || | | | Sbjct 88463 TGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTCGACTACGAGAATGAGCGCTATAAC 88522 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || |||||||| || | ||| ||||| |||| | || ||| Sbjct 88523 TTCCAGTTGCTGCACGAAGTCACCCAGGTCGTCGTTCGCAACCTGAACAAGATCATCGAT 88582 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 | || || || ||| | || || || || ||| | |||||||| ||||| Sbjct 88583 ATCAACCACTATCCTGTTCCGGAGGCCCGCAAGAGCAACATGCGCCACCGTCCTATTGGC 88642 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT-GATTC 105285 | || || |||||||| || |||| | ||||| | || || || ||| || || Sbjct 88643 GTGGGCGTCCAGGGTCTGGCCGATG----CTTTCTTGGCCCTCCGCATGCCTTTCGAGTC 88698 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || || || | || || || || |||||||| || |||||||| || Sbjct 88699 ACCTGAGGCTCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCCGCCCTCAC 88758 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || | || | || |||||||||| || || | | | ||||| ||||| | Sbjct 88759 CGCATCGTGTGACATTGCCAAGGTTGATGGCCCCTACTCATCATACGAGGGATCTCCCGT 88818 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGG--GAAGGT-GAGACCAAGCTTCACTACGA 105462 || || || | || || | || |||||| || || || || || || || Sbjct 88819 CTCCCAGGGTATCCTGCAGTACGACATGTGGAACAATGTCAAGCCCTCTGATCTCTGGGA 88878 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 |||||| || | |||| |||||| || | ||| | || ||||| | | ||||| Sbjct 88879 CTGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAACAGCTTGTTGATGGC 88938 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 || ||||| || ||||| || | || ||| |||| || || || |||||||| ||||| Sbjct 88939 GCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTA 88998 Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CA-A 105639 || | |||||||||| | | | ||||| || ||||| ||||||| || Sbjct 88999 TACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCCAAGTTGTCAATCCATG 89058 Query 105640 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 105699 || ||| |||| || || |||||| ||||| |||| ||||| | | ||| Sbjct 89059 GCTGCTCAAGGAT---CTGGTGCAGTGTGGTCTGTGGTCTGAGGACCTGAAGAACCGCAT 89115 Query 105700 GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTT 105759 | | || ||| || || || |||||| || ||| |||| || ||| | Sbjct 89116 CATCGCTGAGGATGGCTCTATCCAGAATATTCGCAGCATCCCAGATGACATCAAGGCCCT 89175 Query 105760 GTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGG 105819 ||| || || ||||| ||| | || | || | | ||||| || |||||||| Sbjct 89176 CTACAAGACCGTCTGGGAGATCTCGCAGAGGACCATCGTGCAGATGGCTGCCGATCGTGG 89235 Query 105820 TCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATG-GAAAGTCCAACGATGTC 105876 | |||||| || | |||| ||| |||| | |||| | || || | ||| Sbjct 89236 TGCCTTCATCGACC--AGTCCCAGTCGCTGAACATACACATGCGTGAG-CCTTCTATGGG 89292 Query 105877 CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 105936 |||| || || |||||| | | |||||||| ||||||||| || || ||||| || Sbjct 89293 CAAGATCACTAGCATGCACTTCACCGGTTGGAAGCTGGGTCTCAAGACTGGCATGTACTA 89352 Query 105937 CCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 105974 |||||| | ||||| ||| ||| || |||||||||| Sbjct 89353 CCTCCGCACACAGGCAGCGGCAGCG-CCGATTCAGTTCA 89390 >seq1610 Length=70883 Score = 105 bits (116), Expect = 8e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789 ||||||| || || | ||||| || || |||||| ||| |||| | | || ||| Sbjct 61955 CAGTTCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGACCGTGAGT 62014 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | ||| ||| |||| || | |||||||| ||| || ||||| |||||| || Sbjct 62015 C---TACCTACGCTCAGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTG 62071 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | | ||| | || | ||||| |||||||| ||||| ||||| || || ||||| Sbjct 62072 GCGCTTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCT 62131 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||| || ||||||||||||||||| || ||| Sbjct 62132 CCAACGAACTCATCTCTCGTGACGAGGGTCTGCAC 62166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583242033583760