Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq70 143 8e-29 >seq70 Length=90055 Score = 143 bits (158), Expect = 8e-29 Identities = 606/951 (64%), Gaps = 11/951 (1%) Strand=Plus/Plus Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330 ||||| || || || ||| | || || ||||||| |||||| || ||||| || |||||| Sbjct 64288 GCAAACGACCAGGGCAACCGTACCACCCCATCATTCGTTGCTTTCACCGACACAGAGCGT 64347 Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390 |||| || ||| |||| || || || | || || || | || || || || || Sbjct 64348 CTGATCGGCGATGCTGCGAAGAACCAGGTCGCCATGAACCCCCACAACACCGTCTTCGAC 64407 Query 349391 GCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAATCTGATCTAAAA 349447 || ||||| | |||||| | | || ||| ||| || | || | || Sbjct 64408 GCGAAGCGGTTGATTGGTCGCAAGTTCCAGGAC---TCTGAGGTGCAGGCCGACATGAAG 64464 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATAT 349507 || || || || | || | | | ||| || || || | || ||||| || | Sbjct 64465 CACTTCCCCTTCAAGGTCAT-CGAGAAG--GGAAGCAAGCCTGTCATCGAGGTCGAGTTC 64521 Query 349508 AAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATG 349567 || || || || || || ||||| || ||||| || ||||| | || ||| Sbjct 64522 AAGGGCGAGACCAAGCACTTCACCCCCGAGGAGATTTCCTCGATGGTCCTGACCAAGATG 64581 Query 349568 AAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCA 349627 || | ||||| || || | |||| || || | | ||||| | || || || Sbjct 64582 CGCGAGACCGCTGAGGCCTACCTGGGTGGCACCGTCAACAACGCTGTCGTCACCGTTCCT 64641 Query 349628 GCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTA 349687 ||||| || || || ||||||| || || || ||||| || ||||| || | Sbjct 64642 GCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAGGATGCCGGTCTGATTGCTGGCCTC 64701 Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAA 349747 || || || | || || || || ||||| || || || || || || || || || || Sbjct 64702 AACGTCCTCCGTATCATCAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTCGACAAG 64761 Query 349748 ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTA 349807 | | ||| || || | ||||| || ||| | ||||||||||| || ||||| Sbjct 64762 AAGGTTGAGGGCGAGCGCAACGTCCTTATCTTCGATCTGGGTGGTGGTACCTTCGATGTT 64821 Query 349808 TCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACAT 349867 || || || || | || || || || || ||||| || | || |||||||| || || Sbjct 64822 TCCCTCCTGACCATCGAGGAAGGCATCTTCGAAGTCAAGTCCACCGCTGGTGACACTCAC 64881 Query 349868 CTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGT 349927 || ||||| || || || || || ||||| || || || ||| |||| || || || Sbjct 64882 CTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTTCAAGAGTTCAAACG- 64940 Query 349928 CAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTG 349986 ||||| ||| | || | | || || | || ||||||| || ||||||| || Sbjct 64941 CAAGCATAAGAAGGACTTAAGCTCCAACCCCCGGGCTTTGCGTCGTCTCCGAACTGCTTG 65000 Query 349987 TGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCT 350046 || ||||| |||||| | | || || | |||| ||||| || || || || || || Sbjct 65001 CGAGCGTGCGAAGCGTACGCTCTCTTCGTCGGCCCAGACCTCGATCGAGATCGACTCCCT 65060 Query 350047 TGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTAT 350106 || || | || |||| | || || || |||||||| || || || | || Sbjct 65061 GTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTTTGCCA 65120 Query 350107 GGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTC 350166 ||| ||||| | | || || | ||||| || || | | || || || || Sbjct 65121 GGACCTTTTCCGCTCCACCCTGCAGCCTGTCGACCGTGTCCTGACGGACGCTAAGATCGA 65180 Query 350167 CAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 ||| |||| || | || | || | ||||| |||||||| ||||| || Sbjct 65181 CAAGTCTCAGGTTCACGAGATCGTCCTGGTTGGCGGTTCTACTCGTATCCC 65231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515204427856922