Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 358 8e-94 seq1883 194 2e-44 seq5 190 2e-43 seq2341 159 4e-34 seq9 107 2e-18 >seq17 Length=201905 Score = 358 bits (396), Expect = 8e-94 Identities = 1171/1792 (65%), Gaps = 62/1792 (3%) Strand=Plus/Minus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| ||| ||| |||| | || || || ||||||||||| |||||| Sbjct 89394 ACTGTGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTG 89335 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 || ||| |||||| ||| | |||||| | ||| ||| | | | || | | Sbjct 89334 AGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGGCTCACGC 89275 Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184 ||| |||||||| ||||| ||||| |||||| || |||||||| || ||||| | Sbjct 89274 ATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGC 89215 Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA---CCTTACGAAGCTCCTCT 80241 | || | | | || | || ||||| || || || | |||| || | || ||| Sbjct 89214 ACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTT--GATG-TCATCT 89158 Query 80242 GGAATG-TCC--AGATTTTGCACACTGCCACCGTCCTTTACAATTTGATTTTTCAATTCA 80298 || ||| | | | ||| || | | |||| | || | || | || |||| || Sbjct 89157 GGGATGCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCC 89098 Query 80299 GACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAGGT---GCTTGTTAATCATGACA 80355 | ||| | |||| || |||||| || | || | ||| || | || Sbjct 89097 TCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAA-CTTGG-- 89041 Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || ||||| ||| ||| |||| | ||| | || || |||||||| |||| Sbjct 89040 AACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCG 88981 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||||| || |||||||| | || || || ||||| || | | ||||| || Sbjct 88980 TTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTG 88921 Query 80476 CGCAGGCCGTGCTTCTTGATAT----CCTC---GCG--CAAATCTGACCAAAAATCAACC 80526 || | ||||||| |||||| | | || ||| | | || ||| | |||| Sbjct 88920 CGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTC---CCAGAGATCAG-- 88866 Query 80527 CCAACGCTGTGACC-----CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACC 80581 | ||| |||| ||||||||||| ||||| ||| |||| || | ||||| | Sbjct 88865 --AGGGCT-TGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATC 88809 Query 80582 CCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCG 80641 || || | | ||| ||||| || |||||| | |||||||| | | ||||| | Sbjct 88808 CCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGG 88749 Query 80642 CGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACG 80701 |||| || ||| ||| |||| |||||||| | || |||| || ||||| | Sbjct 88748 CGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAG 88689 Query 80702 ACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGT 80761 || || | || ||| | || ||||| ||||| ||||| | | | || || |||| Sbjct 88688 GCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGT 88629 Query 80762 GGCGCTTGTTCGATCGCTCGG-CCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGG 80820 ||||| |||| | || ||| ||||||||| || || ||| ||||||||| | Sbjct 88628 GGCGCATGTT-GCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTG 88570 Query 80821 TTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGT-- 80878 ||||||||||| || ||| | || || || || || ||| |||| | | | Sbjct 88569 TTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTATAGCGCTCA 88510 Query 80879 -TCCCCT--TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCT 80934 || | | || || || || ||| | |||||||| ||||| || || ||||| Sbjct 88509 TTCTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCG 88450 Query 80935 TCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGG 80994 |||| | | | | |||||| ||| || ||||| | || || ||| || || ||| Sbjct 88449 TCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGG 88390 Query 80995 TTTTTCTGGTTTGACTTGGCGTTGCAAGCGT---CCTTGTAGCACATGTACGGGGTACCG 81051 || |||||||| |||| |||| |||| ||||||| ||||| | ||| | || Sbjct 88389 TTCTTCTGGTTGCTCTTGCGGTTG---GCGTGATCCTTGTACAACATGAAGGGGTTGCCT 88333 Query 81052 GTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGG 81111 |||||| || | || ||||||||| | ||| | || ||||||| | ||| || Sbjct 88332 GTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGGGTCTTTTGG 88273 Query 81112 AATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTC 81170 || ||| | | ||||| |||| | ||||||| | |||| | ||| | Sbjct 88272 CCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGT-C 88214 Query 81171 AGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGC 81230 | ||| | ||||||||||| ||||||||||| ||||||| || ||||| ||| Sbjct 88213 GGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACG 88154 Query 81231 CTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCT 81289 ||||||||| || |||||||||||||| ||| ||||| || ||| || |||| | Sbjct 88153 CTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCA-CGGACCTCTT 88095 Query 81290 CATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCA 81349 | | || ||||| |||| ||||| || || | || || || ||||||||||||| Sbjct 88094 CCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCA 88035 Query 81350 GATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCG 81406 | || | ||| | | || ||| | ||||||||| | |||||| |||||||| Sbjct 88034 GGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGT 87975 Query 81407 CGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATAC 81466 ||| || |||||||||||||||||||| |||| ||| ||||| || || |||| Sbjct 87974 TGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGT 87915 Query 81467 GCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGA 81524 || || |||| || | | || ||| ||||| ||||| || | | ||| || Sbjct 87914 AGGAGCCGGTGGCACGGATGCGGTGGACGTTG--AGACCAATGCCTCCAGCCATCTTGGA 87857 Query 81525 AATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTC 81584 ||| ||||| |||| ||| ||||| || ||||| ||||| || | |||||||| Sbjct 87856 GATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTC 87797 Query 81585 AAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGT 81644 || | ||| || |||| ||| | | ||||||||||||||| ||||| | Sbjct 87796 AACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGA 87737 Query 81645 CGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATC 81704 |||||| |||| | ||| ||||| || ||||| || || | || | Sbjct 87736 CGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTT 87677 Query 81705 GTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||| || || || | ||| |||||||| | ||||| ||| ||| |||| Sbjct 87676 GTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCG 87625 >seq1883 Length=75506 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || ||||||||||| ||||| | Sbjct 35860 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCT 35801 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || || |||||||||||||| || ||||| |||||| Sbjct 35800 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 35741 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||| ||||| |||||||||| || ||||| | ||||| || Sbjct 35740 CAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 35681 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | ||||| || || || Sbjct 35680 ATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGG 35634 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 35632 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCC 35573 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || |||||||||||||| || ||||| || ||| Sbjct 35572 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 35513 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||| | || || || | ||||| || Sbjct 35512 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAAC 35453 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| | ||||| |||||||| Sbjct 35452 ATCCAGAAGGAGTCCACGCTCCACCTTGTCCTCCGTCTCCGCGGTGG 35406 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || || ||||| || ||| Sbjct 35404 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 35345 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct 35344 GACACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 35285 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| || || || | || || || | ||||| || Sbjct 35284 CAGCGTCTTATCTTTGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 35225 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || || || || | || ||||||| || ||||| || Sbjct 35224 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGGCA 35175 >seq5 Length=272196 Score = 190 bits (210), Expect = 2e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 174364 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCT 174305 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | ||| | ||||| || || |||||||||||||| ||||| |||||| Sbjct 174304 TCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGAC 174245 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||||| || || || ||||| ||||| |||||||| | |||||||| | |||||| Sbjct 174244 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTAT 174185 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||| || || || ||| |||| || || ||||| Sbjct 174184 AACATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 174135 >seq2341 Length=145185 Score = 159 bits (176), Expect = 4e-34 Identities = 211/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022 || |||||||| ||||| ||| || || |||||| ||||||||||| | | ||| Sbjct 67818 CGATCCATTCCGTCCGTGGTGGATGGTCTGAAGCCTGGCCAGCGCAAGGTTGTGTTCGCT 67759 Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCA 32082 ||| ||||| |||||| | | |||| |||||||| | ||| | |||||||| | Sbjct 67758 TGCTTCAAGCGGAACCTAACCAAGGACAAGAAGGTGGTCGAACTGGCTGGCTACGTCTCT 67699 Query 32083 GAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCT 32142 || || || || ||||||||||| ||||| || || || ||||| || ||| || Sbjct 67698 GAACAGACTGCTTATCACCACGGTGAGGCCTCACTGCAACAGACCATCATCGGCCTGGCA 67639 Query 32143 CAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACC 32202 ||||||||||| ||| | || ||| | ||| | | ||||| || | || || | Sbjct 67638 CAGAACTTTGTGGGTTCGAACAACGTCAACATCTTGGAGCCCAGCGGCAATTTCGGTTCT 67579 Query 32203 CGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCT 32255 || ||||||||||| | |||||||| ||| | || |||||||| |||||||| Sbjct 67578 CGTCTCGCCGGTGGTAGCGATGCTGCCAGCGCTCGATACATCTTTACCCGTCT 67526 >seq9 Length=228969 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || || |||||||| || |||||||| ||||| || | ||| Sbjct 118476 CTTCGTGAAGACTCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCAT 118417 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||||| || || |||||||||||||| || ||||| || || ||||| | Sbjct 118416 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 118357 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| || ||||||| || || || | ||||| || |||| || Sbjct 118356 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 118297 Query 27594 GG 27595 || Sbjct 118296 GG 118295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570292050262880