Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq229 158 1e-33
>seq229
Length=27093
Score = 158 bits (174), Expect = 1e-33
Identities = 217/302 (72%), Gaps = 6/302 (2%)
Strand=Plus/Minus
Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 20126 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 20070
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177
||||||||| |||| || |||||| |||| ||| | ||||| ||| | || |||
Sbjct 20069 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCAC 20010
Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
| | | |||||| || || ||| || | |||||| || | | ||| ||||||
Sbjct 20009 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 19950
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
|| ||||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 19949 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 19890
Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357
| | | |||| |||||| || | | || |||||| ||||||||||||| || ||
Sbjct 19889 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCC 19830
Query 30358 CT 30359
||
Sbjct 19829 CT 19828
Score = 114 bits (126), Expect = 1e-20
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29852 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCT 29911
||||||| ||| ||||| ||| |||| ||||||| |||| ||||||||| |||||
Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360
Query 29912 CCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29970
|||| | ||| | || || ||||| | || | ||||| || ||||||| |||
Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301
Query 29971 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 30030
|| || | ||||||||||||||| || || || ||||| ||||| || | |||| |||
Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATATCGCAGGACCGCTG 20241
Query 30031 GTAGAGCTGACA 30042
||| ||||| ||
Sbjct 20240 GTACAGCTGGCA 20229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406297653788808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |