Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq229 141 8e-29 >seq229 Length=27093 Score = 141 bits (156), Expect = 8e-29 Identities = 275/398 (69%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 |||||||| |||||||| || |||| | || ||| | | ||||| || |||||| Sbjct 19731 CCGCTGCTCACGACGAAGCGCGTGTTCCACCGGGCGGTGCTGGCCGAGCTCCTCTGGTTC 19790 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| ||| || ||| | | |||| | | ||| || ||||||||||||| Sbjct 19791 GTGTCGGGCGCGACGTCGTCGCTGCCGCTCAGCGCGCAGGGCGTCAAGATCTGGGACGGC 19850 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGACTT 34401 |||| || || | || ||||||| ||| ||| | | || |||||||||||| | Sbjct 19851 AACGGCTCGCGCGCGTTCCTGGACA-GCGTGGGCCTGGCGCACCGCGAGGAGGGCGACCT 19909 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCG-AAG 34460 ||||| || ||||||||||||||| | ||||| || || ||||| || | ||| | Sbjct 19910 CGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCCGAGTA-CGTCGACGCGCGCG 19968 Query 34461 CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGA 34520 ||||||| | || ||||| | ||||||||| | | || | ||| || | || Sbjct 19969 CGGACTACGCCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCGTGCACAAGCTGCGGACGA 20028 Query 34521 ACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGG 34580 |||| | ||| | ||||| | || ||||||||||||| ||||| || | |||| Sbjct 20029 ACCCGTACGACCGGCGGATCATCCTGAGCGCGTGGAACCCCAAGGACCTGAAGATCATGG 20088 Query 34581 CGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617 |||| || |||||||||| | ||| || |||||||| Sbjct 20089 CGCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTACGT 20125 Score = 141 bits (156), Expect = 8e-29 Identities = 275/398 (69%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 |||||||| || ||| | |||||||||| || |||||||| | || ||||| || Sbjct 20125 ACGTAGAACTGCGCAAACA-TGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGG 20067 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 ||||||||||| || | ||||| | ||| | |||||| | || ||| | || Sbjct 20066 GTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCACGAC 20007 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCG 6905 | | ||||||||| | ||||| || | |||||||| ||| | || ||||| | Sbjct 20006 CTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACG-TACTCGG 19948 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | || ||||| | ||||||||||||||| || ||||| | |||||||||||| || | Sbjct 19947 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCG 19888 Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | ||| ||| ||||||| || | || || |||| ||||||||||||| || ||| Sbjct 19887 CCAGGCCCACGC-TGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 19829 Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084 | | |||| | | ||| || ||| ||||||||| || ||||| | | | Sbjct 19828 TGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGC 19769 Query 7085 ACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 || || | |||| || |||||||| |||||||| Sbjct 19768 ACCGCCCGGTGGAACACGCGCTTCGTCGTGAGCAGCGG 19731 Score = 107 bits (118), Expect = 2e-18 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679 |||| || | ||| ||||||||| || || || || | || ||||| | || |||| Sbjct 20212 CGAAGGGCCACCTGCACTGCCAGCTGTACCAGCGGTCCTGCGATATGGGCCTCGGCGTGC 20271 Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739 |||||||||| || || ||||| ||||| ||| |||||||||| || || ||| | Sbjct 20272 CGTTCAACATCGCCAGCTACGCGCTGCTGACGCACATGATCGCGCACGT-GTGTGACCTC 20330 Query 34740 TTCCTGGGGAG-CTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCG 34796 ||| ||| || ||| || |||| |||| || ||||| ||||| || ||||| | | Sbjct 20331 GTCCCGGGCAGCCTGACGC--ACGTCATGGGCGACGCGCACGTCTACGTGGACCACGTGG 20388 Query 34797 AGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845 | |||||||| |||||| | || ||||| || |||||| |||| Sbjct 20389 ACGCGCTCCGGACGCAGCTGGAGCGGGAGCCGCGCGAGTTCCCGGAGCT 20437 Score = 107 bits (118), Expect = 2e-18 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559 |||| |||||| || ||||| || | |||||| |||||||| || | ||||| | Sbjct 20437 AGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCC 20378 Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCCCACG 6616 | ||||| ||||| || |||| |||| || ||| || ||| ||| | ||| Sbjct 20377 ACGTAGACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTGCCCGGGACGAGGTCACAC- 20321 Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || |||||||||| ||| ||||| ||||| || || |||||||||||||| || | Sbjct 20320 ACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGG 20261 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725 ||||| || | || || || || ||||||||| ||| | || |||| Sbjct 20260 CCCATATCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCG 20212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448247977157280