Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq229 141 8e-29
>seq229
Length=27093
Score = 141 bits (156), Expect = 8e-29
Identities = 275/398 (69%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|||||||| |||||||| || |||| | || ||| | | ||||| || ||||||
Sbjct 19731 CCGCTGCTCACGACGAAGCGCGTGTTCCACCGGGCGGTGCTGGCCGAGCTCCTCTGGTTC 19790
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342
||| ||| || ||| | | |||| | | ||| || |||||||||||||
Sbjct 19791 GTGTCGGGCGCGACGTCGTCGCTGCCGCTCAGCGCGCAGGGCGTCAAGATCTGGGACGGC 19850
Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGACTT 34401
|||| || || | || ||||||| ||| ||| | | || |||||||||||| |
Sbjct 19851 AACGGCTCGCGCGCGTTCCTGGACA-GCGTGGGCCTGGCGCACCGCGAGGAGGGCGACCT 19909
Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCG-AAG 34460
||||| || ||||||||||||||| | ||||| || || ||||| || | ||| |
Sbjct 19910 CGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCCGAGTA-CGTCGACGCGCGCG 19968
Query 34461 CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGA 34520
||||||| | || ||||| | ||||||||| | | || | ||| || | ||
Sbjct 19969 CGGACTACGCCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCGTGCACAAGCTGCGGACGA 20028
Query 34521 ACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGG 34580
|||| | ||| | ||||| | || ||||||||||||| ||||| || | ||||
Sbjct 20029 ACCCGTACGACCGGCGGATCATCCTGAGCGCGTGGAACCCCAAGGACCTGAAGATCATGG 20088
Query 34581 CGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
|||| || |||||||||| | ||| || ||||||||
Sbjct 20089 CGCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTACGT 20125
Score = 141 bits (156), Expect = 8e-29
Identities = 275/398 (69%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|||||||| || ||| | |||||||||| || |||||||| | || ||||| ||
Sbjct 20125 ACGTAGAACTGCGCAAACA-TGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGG 20067
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||||||||| || | ||||| | ||| | |||||| | || ||| | ||
Sbjct 20066 GTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCACGAC 20007
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCG 6905
| | ||||||||| | ||||| || | |||||||| ||| | || ||||| |
Sbjct 20006 CTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACG-TACTCGG 19948
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| || ||||| | ||||||||||||||| || ||||| | |||||||||||| || |
Sbjct 19947 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCG 19888
Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
| ||| ||| ||||||| || | || || |||| ||||||||||||| || |||
Sbjct 19887 CCAGGCCCACGC-TGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 19829
Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084
| | |||| | | ||| || ||| ||||||||| || ||||| | | |
Sbjct 19828 TGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGC 19769
Query 7085 ACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|| || | |||| || |||||||| ||||||||
Sbjct 19768 ACCGCCCGGTGGAACACGCGCTTCGTCGTGAGCAGCGG 19731
Score = 107 bits (118), Expect = 2e-18
Identities = 164/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679
|||| || | ||| ||||||||| || || || || | || ||||| | || ||||
Sbjct 20212 CGAAGGGCCACCTGCACTGCCAGCTGTACCAGCGGTCCTGCGATATGGGCCTCGGCGTGC 20271
Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739
|||||||||| || || ||||| ||||| ||| |||||||||| || || ||| |
Sbjct 20272 CGTTCAACATCGCCAGCTACGCGCTGCTGACGCACATGATCGCGCACGT-GTGTGACCTC 20330
Query 34740 TTCCTGGGGAG-CTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCG 34796
||| ||| || ||| || |||| |||| || ||||| ||||| || ||||| | |
Sbjct 20331 GTCCCGGGCAGCCTGACGC--ACGTCATGGGCGACGCGCACGTCTACGTGGACCACGTGG 20388
Query 34797 AGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845
| |||||||| |||||| | || ||||| || |||||| ||||
Sbjct 20389 ACGCGCTCCGGACGCAGCTGGAGCGGGAGCCGCGCGAGTTCCCGGAGCT 20437
Score = 107 bits (118), Expect = 2e-18
Identities = 164/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559
|||| |||||| || ||||| || | |||||| |||||||| || | ||||| |
Sbjct 20437 AGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCC 20378
Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCCCACG 6616
| ||||| ||||| || |||| |||| || ||| || ||| ||| | |||
Sbjct 20377 ACGTAGACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTGCCCGGGACGAGGTCACAC- 20321
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|| || |||||||||| ||| ||||| ||||| || || |||||||||||||| || |
Sbjct 20320 ACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGG 20261
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725
||||| || | || || || || ||||||||| ||| | || ||||
Sbjct 20260 CCCATATCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCG 20212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448247977157280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |