Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq229 123 2e-23
>seq229
Length=27093
Score = 123 bits (136), Expect = 2e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683
||||||| ||| ||||| ||| |||| ||||||||||| | ||||||||| || ||
Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360
Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| | ||| | || || ||||| | || | ||||| || ||||||| |||
Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
|| || | ||||||||||||||| || ||||| ||||| ||||| || | |||| |||
Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATATCGCAGGACCGCTG 20241
Query 29803 GTAGAGCTGGCA 29814
||| ||||||||
Sbjct 20240 GTACAGCTGGCA 20229
Score = 109 bits (120), Expect = 4e-19
Identities = 208/313 (66%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 29833 CACGTAAAACTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTT 29889
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 20126 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 20070
Query 29890 GGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 29949
||||||||| || | || |||||| |||| ||| | ||||| ||| | || |||
Sbjct 20069 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCAC 20010
Query 29950 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNN 30009
| | | |||||| || || ||| || | |||||| |
Sbjct 20009 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 19950
Query 30010 NNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30069
|||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 19949 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 19890
Query 30070 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30129
| | | |||| |||||| || | | || |||||| ||||||||||||| || ||
Sbjct 19889 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCC 19830
Query 30130 CTTCTCGGAGAGC 30142
|| | || ||||
Sbjct 19829 CTGCGCGCTGAGC 19817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406150458406564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |