Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq229 147 2e-30
>seq229
Length=27093
Score = 147 bits (162), Expect = 2e-30
Identities = 206/289 (71%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407
||||||||| || || ||||||| || ||| ||||||||||| |||| || ||||||
Sbjct 20105 GTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGGGTTCCACGCGCTCAGGATGAT 20046
Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467
|||| ||| | ||||| ||| | || |||| | | |||||| || || ||
Sbjct 20045 CCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCACGACCTCCGCCAGCTGGTCGACGCC 19986
Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527
| || | |||||| | | | ||| |||||| || ||||| |||| ||| |||||
Sbjct 19985 CTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGGCGCCGAAGTGCCGCCACTGGAA 19926
Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 27587
||||||||| || || ||||| ||||| || | |||| | | |||| |||||| ||
Sbjct 19925 CCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCGCCAGGCCCACGCTGTCCAGGAA 19866
Query 27588 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 27636
| | || |||||| ||||||||||||| || |||| | || ||||
Sbjct 19865 CGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGCGCGCTGAGC 19817
Score = 118 bits (130), Expect = 8e-22
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177
||||||| ||| ||||| ||| |||| |||||||| |||| ||||||||| |||||
Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360
Query 27178 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236
|||| | ||| | || || ||||| | || | ||||| || ||||||| |||
Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301
Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296
|| || | ||||||||||||||| || || || ||||| ||||| || | |||| |||
Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATATCGCAGGACCGCTG 20241
Query 27297 GTAGAGCTGACA 27308
||| ||||| ||
Sbjct 20240 GTACAGCTGGCA 20229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369495608328194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |