Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq229 147 2e-30 >seq229 Length=27093 Score = 147 bits (162), Expect = 2e-30 Identities = 206/289 (71%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 ||||||||| || || ||||||| || ||| ||||||||||| |||| || |||||| Sbjct 20105 GTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGGGTTCCACGCGCTCAGGATGAT 20046 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467 |||| ||| | ||||| ||| | || |||| | | |||||| || || || Sbjct 20045 CCGCCGGTCGTACGGGTTCGTCCGCAGCTTGTGCACGACCTCCGCCAGCTGGTCGACGCC 19986 Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 | || | |||||| | | | ||| |||||| || ||||| |||| ||| ||||| Sbjct 19985 CTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGGCGCCGAAGTGCCGCCACTGGAA 19926 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 27587 ||||||||| || || ||||| ||||| || | |||| | | |||| |||||| || Sbjct 19925 CCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCGCCAGGCCCACGCTGTCCAGGAA 19866 Query 27588 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 27636 | | || |||||| ||||||||||||| || |||| | || |||| Sbjct 19865 CGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGCGCGCTGAGC 19817 Score = 118 bits (130), Expect = 8e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||||| ||| ||||| ||| |||| |||||||| |||| ||||||||| ||||| Sbjct 20419 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 20360 Query 27178 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236 |||| | ||| | || || ||||| | || | ||||| || ||||||| ||| Sbjct 20359 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCACACACGTGCGCGATCATGTGCGT 20301 Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296 || || | ||||||||||||||| || || || ||||| ||||| || | |||| ||| Sbjct 20300 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATATCGCAGGACCGCTG 20241 Query 27297 GTAGAGCTGACA 27308 ||| ||||| || Sbjct 20240 GTACAGCTGGCA 20229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369495608328194