Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq17 174 2e-38
>seq17
Length=201905
Score = 174 bits (192), Expect = 2e-38
Identities = 394/589 (67%), Gaps = 10/589 (2%)
Strand=Plus/Minus
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609
|| || || || || || ||||||| | ||| || || | | || || || |||||
Sbjct 88206 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATG 88147
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
|||||||| || ||||| || |||| || || || || | | ||||| |||||
Sbjct 88146 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCG 88087
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
||||| || || |||||||| | | ||||| |||||||| || || || ||
Sbjct 88086 TGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATG 88027
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | | |||| || || ||||| || |||||||| | |||| ||||||||| || |
Sbjct 88026 GCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 87967
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|| | |||||| || || ||||| || || || || || || |||| || || ||
Sbjct 87966 ACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCG 87907
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
||||| || | || || || ||||| ||||| || ||||| | |||
Sbjct 87906 GTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCA 87847
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969
||| |||| || |||||||||||||| || || || ||| |||||| || || ||
Sbjct 87846 CAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAG 87787
Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029
|| |||| || ||| || || ||||| |||| || || || || || |||
Sbjct 87786 CACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTG 87727
Query 77030 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATAT----CCCATT 77084
|| | || | || | |||| ||||| || |||| ||| || || | |||
Sbjct 87726 AAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCA 87668
Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133
|||| || |||||||||||||||| ||| ||||| || || || ||
Sbjct 87667 GATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGAC 87623
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
||||||||||| || | | |||| | ||| || || |||||||| ||||| || |||
Sbjct 89391 GTGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGA 89332
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
||||| |||| ||| ||| |||||||| || | ||| | || || ||
Sbjct 89331 CCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGGCTCACGCATG 89272
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
|| || |||| |||||| || |||||||| || || | ||| || ||||| | |
Sbjct 89271 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89212
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612
|||||| | || | || ||||| | || ||| | | ||||| ||||||||
Sbjct 89211 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGG 89156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712911461335680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |