Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016 -01-13] 2,574 sequences; 43,968,379 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq17 174 2e-38 >seq17 Length=201905 Score = 174 bits (192), Expect = 2e-38 Identities = 394/589 (67%), Gaps = 10/589 (2%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || || || || || ||||||| | ||| || || | | || || || ||||| Sbjct 88206 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATG 88147 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 |||||||| || ||||| || |||| || || || || | | ||||| ||||| Sbjct 88146 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCG 88087 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| || || |||||||| | | ||||| |||||||| || || || || Sbjct 88086 TGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATG 88027 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | |||| || || ||||| || |||||||| | |||| ||||||||| || | Sbjct 88026 GCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 87967 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | |||||| || || ||||| || || || || || || |||| || || || Sbjct 87966 ACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCG 87907 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| || | || || || ||||| ||||| || ||||| | ||| Sbjct 87906 GTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCA 87847 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 ||| |||| || |||||||||||||| || || || ||| |||||| || || || Sbjct 87846 CAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAG 87787 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 || |||| || ||| || || ||||| |||| || || || || || ||| Sbjct 87786 CACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTG 87727 Query 77030 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATAT----CCCATT 77084 || | || | || | |||| ||||| || |||| ||| || || | ||| Sbjct 87726 AAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCA 87668 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133 |||| || |||||||||||||||| ||| ||||| || || || || Sbjct 87667 GATG----CCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGAC 87623 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||||||||| || | | |||| | ||| || || |||||||| ||||| || ||| Sbjct 89391 GTGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGA 89332 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 ||||| |||| ||| ||| |||||||| || | ||| | || || || Sbjct 89331 CCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGGCTCACGCATG 89272 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 || || |||| |||||| || |||||||| || || | ||| || ||||| | | Sbjct 89271 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 89212 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612 |||||| | || | || ||||| | || ||| | | ||||| |||||||| Sbjct 89211 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGG 89156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712911461335680