Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1883 123 6e-23
seq5 113 1e-19
seq9 100 7e-16
>seq1883
Length=75506
Score = 123 bits (136), Expect = 6e-23
Identities = 161/221 (73%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || || || ||||| || ||||||||||| |||| | ||| |
Sbjct 35414 GAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCG 35473
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || || || ||||| ||||||||||| || | |||||| |||| | ||| ||
Sbjct 35474 GCCGTCCTCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCC 35531
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || || | || | | |||| || ||| || || ||
Sbjct 35532 TCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGG 35591
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||||||||| ||||||| ||||||
Sbjct 35592 GTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 35632
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||||| || ||||||||||| |||| | || | |||||
Sbjct 35648 GAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 35707
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||| || || | ||||||||||| | ||| || ||||| ||
Sbjct 35708 CTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC 35767
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | |||| || ||| || |||||||| || ||
Sbjct 35768 CTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGT 35827
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| ||||| ||||| ||||||| |||||| ||
Sbjct 35828 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 35863
>seq5
Length=272196
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || ||||| || |||||||| || |||| | || | || ||
Sbjct 174150 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTACGGCCGTCC 174209
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| || | ||| ||||| | | || || ||||| ||
Sbjct 174210 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 174269
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | |||| ||| ||| || ||||| || |||||
Sbjct 174270 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 174329
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||||| ||||| ||||||| ||||||
Sbjct 174330 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 174361
>seq9
Length=228969
Score = 100 bits (110), Expect = 7e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | ||| | ||||| || || || |||||||||||
Sbjct 118297 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 118356
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | ||| || |||| | ||| || ||||| || || || || ||||| | ||
Sbjct 118357 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 118416
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | |||| ||| ||| || ||||| || ||||| || ||||| |||||||||||||||
Sbjct 118417 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGAGTCTTCACGAAG 118476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153782747711154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |