Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1883 185 2e-41
seq5 172 1e-37
seq9 170 4e-37
seq1610 105 1e-17
>seq1883
Length=75506
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | ||| || || || |||||||||||||
Sbjct 35178 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 35237
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| ||||| || || || || || || |||||||| | ||| || ||||| |||
Sbjct 35238 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCTGGGGGA 35297
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||||||||| ||||| || || ||| | ||||| |||||||| | ||| ||
Sbjct 35298 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTGTCCGATGATTCCACC 35357
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| ||||||| ||||| ||||| || |||||
Sbjct 35358 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 35404
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || || || | |||| || || |||||||||||||| |
Sbjct 35405 ACCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGA 35464
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| ||||| | ||| || || || ||
Sbjct 35465 CAGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGG 35524
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| || || ||| | ||||| ||||| || | || ||
Sbjct 35525 GATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCAC 35584
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| || || | |||||| ||||| ||||||||
Sbjct 35585 CTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 35632
Score = 150 bits (166), Expect = 4e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| |||||||| || || || || || | ||| || || |||||||||||||| |
Sbjct 35633 ACCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 35692
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || || || |||| || || ||||| ||
Sbjct 35693 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGG 35752
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || || | || || ||||| || | |||||
Sbjct 35753 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGGACTCGAC 35812
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| |||||||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 35813 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 35863
>seq5
Length=272196
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | ||| || || |||||||| ||||| |
Sbjct 174134 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGA 174193
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || || ||||||| || |||||||| ||
Sbjct 174194 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGG 174253
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 174254 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCAC 174313
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 174314 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 174361
>seq9
Length=228969
Score = 170 bits (188), Expect = 4e-37
Identities = 145/179 (81%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | ||| |||||||||||||| || || || ||||| ||||||
Sbjct 118297 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 118356
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || ||||| || || |||||||||||||| |||||||| || || ||| | |||
Sbjct 118357 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 118416
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| |||| || || || || ||||| ||||||||||||| |||||| |||||
Sbjct 118417 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTCAGAGTCTTCACGAA 118475
>seq1610
Length=70883
Score = 105 bits (116), Expect = 1e-17
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
||||| | ||| ||||||||| | ||| || | || || || |||||||||||
Sbjct 62248 GTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCCTGTGCCCTACTCGGCATGAAT 62307
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
|| | | ||| ||| || ||||||||||| || || ||| | |||| || || ||
Sbjct 62308 GCCAACTTGATGAAGCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGC 62367
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
||||||| | || || || | ||||| |||| || |||||| ||| || ||
Sbjct 62368 AACGAGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGC 62427
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||| || ||||||||||| |||||||| | || || || | | | |||||
Sbjct 62428 GGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGT 62480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046704679195396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |