Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 194 2e-44
seq2704 107 2e-18
>seq2528
Length=594046
Score = 194 bits (214), Expect = 2e-44
Identities = 588/904 (65%), Gaps = 22/904 (2%)
Strand=Plus/Minus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
||||||||||| || |||||| |||| || || |||| ||||| | ||| | |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070
|| || |||| | || || || |||||||| | ||| || |||| ||||| | |||
Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333
Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 54127
||||| | | ||| |||||| ||||| | |||||| ||||| | || |
Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276
Query 54128 ATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCT 54187
| ||||| || ||||| ||||| | || |||| | | || || ||||| || ||
Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216
Query 54188 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 54247
||||| || | || | ||| ||||| || | || | | ||| || || || || ||
Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156
Query 54248 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT----TACTAATTGA 54303
|| | ||||| || || | || ||| ||| ||||||| ||| ||| ||| |
Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098
Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363
|||| || || || || | || || || | ||| || ||| | |||||| |||||
Sbjct 61097 --GACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040
Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 54423
|| || |||||||| ||| |||||| | || |||||| | |||||| | |
Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||||||||| || || | || ||||||||||| || || |||||| || | | |||
Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920
Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 54543
||| || || || || || || ||| ||||| || || || || ||||| |
Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860
Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603
||||||||| || | || | | |||| || || || || || || || |
Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800
Query 54604 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663
|| || || |||||||| | ||| ||| || || ||||||| |||| | ||||| ||
Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740
Query 54664 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT----GAAATAATCGGAGAAT 54719
| || | || |||| | || |||| || || || || || |
Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTC----GTAAGTTTTTTGAGAGATCATAGGTGCTG 60684
Query 54720 GTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtt 54779
| || || || ||||| || | | | | ||| | || || | ||| |||
Sbjct 60683 GGCGGTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTT 60624
Query 54780 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 54839
|||| || | || || || || |||||||||||||| ||||| || || ||||| || |
Sbjct 60623 TTTTCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTG 60564
Query 54840 GATG 54843
||||
Sbjct 60563 GATG 60560
Score = 86.0 bits (94), Expect = 7e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| ||||| || || | | || || || |||||||| || ||||| ||
Sbjct 62656 GTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTTTTCAGG 62597
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| || |||||||| ||| ||||| || || | |||| | || || |
Sbjct 62596 CCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCCTTCAAG 62537
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
|||||||||| |||||| || |||||||| || || | || |||||||| | |
Sbjct 62536 TGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATCTGAACA 62477
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATC 53037
|| || | || | |||||||| | || ||||| | | ||||||||
Sbjct 62476 ATGGTTCTCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATC 62427
>seq2704
Length=633058
Score = 107 bits (118), Expect = 2e-18
Identities = 300/455 (66%), Gaps = 4/455 (1%)
Strand=Plus/Plus
Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890
|||||| || || ||||| || || || || || || || || || || |||||
Sbjct 56137 CATAACACCAGCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGA 56196
Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950
| || || || |||||||| ||| |||| || || |||||||| | ||| | | | |
Sbjct 56197 CAGCGAAATGTTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAG-TACTTCTTATTAC 56255
Query 23951 CAATTCAGA-AATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009
||| || || ||| || || ||||||||||| || ||| ||| | || | |
Sbjct 56256 CAAGAGCGACAAGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGT 56315
Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069
|||| || | ||| ||||| || | || | ||||||| ||| || ||| |
Sbjct 56316 TCATGCCGAGAAGGGCGCAAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAG 56375
Query 24070 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAAC 24128
| ||||| |||| || || | | ||||| | | || | | || ||
Sbjct 56376 CTTCTGTGATAACAGCCTCGACGGCCTGGGGGCTCGGGCGGTGACGA-AGGTGAGAGAAG 56434
Query 24129 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 24188
| | ||| || || || ||| || |||||||| | ||| | ||| ||||| ||
Sbjct 56435 AGAAGACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAG 56494
Query 24189 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 24248
||||| || ||||| ||||||||||| || ||||| || || || ||||| || |||
Sbjct 56495 GTGAGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTG 56554
Query 24249 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 24283
|| || || || || || || |||||||||| |||
Sbjct 56555 AAAAAGATACCCTCAACGGCTGCAAAGGCAACAAG 56589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593701383779520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |