Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 138 1e-27
seq1636 122 1e-22
seq2374 120 4e-22
>seq2071
Length=31734
Score = 138 bits (152), Expect = 1e-27
Identities = 199/278 (72%), Gaps = 2/278 (1%)
Strand=Plus/Plus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTG 145730
||||| || | || |||| ||||||| ||||| ||| ||| || | || | |
Sbjct 11448 AGCTGCAGTTCCACCTGCTCGTGGTGGTTGCTGTAGATGTGGCAGTCGCCGCCGGTCCAG 11507
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
|||||||| ||| | | ||| | | || |||| ||||| || || || | |||
Sbjct 11508 -ATGAAGTCGCCGACCGCCAGGTCGCACTGCTGCGCGATCATGTGCGTGAGTAGCGCGTA 11566
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
|||||| |||||||| ||||| ||||| ||||| | ||||||||||||||||||
Sbjct 11567 GCTGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCACTGCGCTGGTACAGCTGGCA 11626
Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|| |||| ||| |||| |||||||||||| | | ||||||||||| ||| |||||
Sbjct 11627 CGACAGCTTGCCGTCCGCGACGTAGAACTGGAAGAACGCGTGGCAGGGCGCCAGCGCCAT 11686
Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948
|| | ||||||| |||||||||| ||| || ||
Sbjct 11687 CTTCGGGATGTCCGCCACGTTCCAGGCGCTGACGATGA 11724
>seq1636
Length=1555
Score = 122 bits (134), Expect = 1e-22
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
|||||| || || ||||| || || | || || | ||||| ||| ||||| | ||
Sbjct 1155 GATGAACTCGCCCGGCTCCAGCCCGCATTGCTGCGCCAGCATGTGGGTGAGCAGCGCATA 1096
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
|||||| |||||||| ||||| || || ||||| ||||||||||||| || || ||
Sbjct 1095 GCTGGCGATGTTGAACGGCACGCCAAGGAAGATGTCGGCCGAGCGCTGGTAGAGTTG-CA 1037
Query 145851 G-GAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCA 145909
| || ||| ||| ||| || ||| |||| ||||| || || |||| ||| ||||
Sbjct 1036 GCGACAGCCGGCCGTTCGCGACATAGGTCTGGAACAGGCAATGACACGGCGCCAGCGCCA 977
Query 145910 TGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945
||||| | || || | |||||||||||||||| ||
Sbjct 976 TGGCGTGGAGATCGCCGGGGTTCCAGGCGGTGACGA 941
>seq2374
Length=591842
Score = 120 bits (132), Expect = 4e-22
Identities = 256/379 (68%), Gaps = 10/379 (3%)
Strand=Plus/Plus
Query 145891 TGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGC 145950
|| || ||||| || ||||| ||| |||||||||||||| ||| | |||| || |
Sbjct 120170 TGACACGGCGGGAGCGCCATCTTCTTCAGATCCGCCGGGTTCCACGCGCTCAGGATGATC 120229
Query 145951 CTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCC 146010
| ||| | ||| ||| ||| | || || | || ||| || ||| ||||| |||
Sbjct 120230 CGCCTATCATAGGGATTCTCCTTCAACTTCCGCACCACCTCCGCGATCTGATCCACACCC 120289
Query 146011 TGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAAC 146070
| ||| ||||| ||||| | ||||| ||| | || || ||||| | ||| ||||||
Sbjct 120290 TTTCCCGCATAATCCGTCTTCGCATCCACATACTCTGCACCAAAGTGACGCCATTGGAAC 120349
Query 146071 CCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAG 146130
||||||||||| ||||| || || || | ||| || ||| | | |||| ||
Sbjct 120350 CCGTAGACGGGGCCCAGATCGCCTACTTCGCGATGCGAGAGGCCGACGGAGTCGAGAAAC 120409
Query 146131 TCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGT 146188
|||| |||||| | |||||||| || ||||| |||| || | | |||
Sbjct 120410 TCCCTACTCCCGTTCCCATCCCAGATTTTCACGCCTGATTCGCTTAGTGGGAGT--GAGG 120467
Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG---ACCCCCCTCCAGAAGACCC 146245
|||| | ||| || |||||||||||| ||||||| || | | |||||| |
Sbjct 120468 ACGTGCAGCCCGAGACGAACCAGAGCAG---TTCGAGGATTACGGCGCGGAGGAAGACGC 120524
Query 146246 TCTTGGTGGTCAGCAGGGG 146264
|||||||| || |||||
Sbjct 120525 GTTTGGTGGTGAGGAGGGG 120543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590056707884960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |