Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2071 138 1e-27 seq1636 122 1e-22 seq2374 120 4e-22 >seq2071 Length=31734 Score = 138 bits (152), Expect = 1e-27 Identities = 199/278 (72%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTG 145730 ||||| || | || |||| ||||||| ||||| ||| ||| || | || | | Sbjct 11448 AGCTGCAGTTCCACCTGCTCGTGGTGGTTGCTGTAGATGTGGCAGTCGCCGCCGGTCCAG 11507 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 |||||||| ||| | | ||| | | || |||| ||||| || || || | ||| Sbjct 11508 -ATGAAGTCGCCGACCGCCAGGTCGCACTGCTGCGCGATCATGTGCGTGAGTAGCGCGTA 11566 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||| ||||| ||||| ||||| | |||||||||||||||||| Sbjct 11567 GCTGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCACTGCGCTGGTACAGCTGGCA 11626 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || |||| ||| |||| |||||||||||| | | ||||||||||| ||| ||||| Sbjct 11627 CGACAGCTTGCCGTCCGCGACGTAGAACTGGAAGAACGCGTGGCAGGGCGCCAGCGCCAT 11686 Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 || | ||||||| |||||||||| ||| || || Sbjct 11687 CTTCGGGATGTCCGCCACGTTCCAGGCGCTGACGATGA 11724 >seq1636 Length=1555 Score = 122 bits (134), Expect = 1e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 |||||| || || ||||| || || | || || | ||||| ||| ||||| | || Sbjct 1155 GATGAACTCGCCCGGCTCCAGCCCGCATTGCTGCGCCAGCATGTGGGTGAGCAGCGCATA 1096 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||| ||||| || || ||||| ||||||||||||| || || || Sbjct 1095 GCTGGCGATGTTGAACGGCACGCCAAGGAAGATGTCGGCCGAGCGCTGGTAGAGTTG-CA 1037 Query 145851 G-GAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCA 145909 | || ||| ||| ||| || ||| |||| ||||| || || |||| ||| |||| Sbjct 1036 GCGACAGCCGGCCGTTCGCGACATAGGTCTGGAACAGGCAATGACACGGCGCCAGCGCCA 977 Query 145910 TGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945 ||||| | || || | |||||||||||||||| || Sbjct 976 TGGCGTGGAGATCGCCGGGGTTCCAGGCGGTGACGA 941 >seq2374 Length=591842 Score = 120 bits (132), Expect = 4e-22 Identities = 256/379 (68%), Gaps = 10/379 (3%) Strand=Plus/Plus Query 145891 TGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGC 145950 || || ||||| || ||||| ||| |||||||||||||| ||| | |||| || | Sbjct 120170 TGACACGGCGGGAGCGCCATCTTCTTCAGATCCGCCGGGTTCCACGCGCTCAGGATGATC 120229 Query 145951 CTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCC 146010 | ||| | ||| ||| ||| | || || | || ||| || ||| ||||| ||| Sbjct 120230 CGCCTATCATAGGGATTCTCCTTCAACTTCCGCACCACCTCCGCGATCTGATCCACACCC 120289 Query 146011 TGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAAC 146070 | ||| ||||| ||||| | ||||| ||| | || || ||||| | ||| |||||| Sbjct 120290 TTTCCCGCATAATCCGTCTTCGCATCCACATACTCTGCACCAAAGTGACGCCATTGGAAC 120349 Query 146071 CCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAG 146130 ||||||||||| ||||| || || || | ||| || ||| | | |||| || Sbjct 120350 CCGTAGACGGGGCCCAGATCGCCTACTTCGCGATGCGAGAGGCCGACGGAGTCGAGAAAC 120409 Query 146131 TCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGT 146188 |||| |||||| | |||||||| || ||||| |||| || | | ||| Sbjct 120410 TCCCTACTCCCGTTCCCATCCCAGATTTTCACGCCTGATTCGCTTAGTGGGAGT--GAGG 120467 Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG---ACCCCCCTCCAGAAGACCC 146245 |||| | ||| || |||||||||||| ||||||| || | | |||||| | Sbjct 120468 ACGTGCAGCCCGAGACGAACCAGAGCAG---TTCGAGGATTACGGCGCGGAGGAAGACGC 120524 Query 146246 TCTTGGTGGTCAGCAGGGG 146264 |||||||| || ||||| Sbjct 120525 GTTTGGTGGTGAGGAGGGG 120543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590056707884960