Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq934 96.9 3e-15 seq1954 82.4 6e-11 >seq934 Length=187681 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| ||||||||||| || | || || || ||||||| ||||| || || Sbjct 9782 GTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCGAGCTGCTTTCCG 9723 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | | |||||| ||| || | |||||||||||| |||||| |||| Sbjct 9722 GCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGTTTTC 9663 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| ||||| | |||| ||| | || |||||||| ||||| | || Sbjct 9662 ACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGTAAGAGTC 9603 Query 21159 TTGACAAATATTTGCA 21174 ||||||| ||||| || Sbjct 9602 TTGACAACTATTTTCA 9587 >seq1954 Length=527115 Score = 82.4 bits (90), Expect = 6e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || |||| ||||| || ||||||| ||||||||||| Sbjct 282699 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTGCCA 282640 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTT 21096 || | || || | |||||||| ||| | ||| |||||||| | ||| ||||| Sbjct 282639 GCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCTGGGATGGATTGTT 282582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422245181522384