Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2704 132 5e-26 seq1954 120 3e-22 seq934 118 1e-21 >seq2704 Length=633058 Score = 132 bits (146), Expect = 5e-26 Identities = 263/384 (68%), Gaps = 4/384 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| | || |||||| | | || | | || | | |||||| Sbjct 56648 AGAAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAATCAACTTTTGCCCAGCGCC 56589 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || ||||| || ||||| ||||| |||| || ||| ||| ||| | || || | Sbjct 56588 TTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCT 56529 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||||| ||||| ||||| || ||| ||| || || || ||| | | Sbjct 56528 GGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCG 56469 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA-TTTGGTGCAGCGACCG 117220 ||||||| || || |||||||||||| | || ||| || || || || || ||| Sbjct 56468 ACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCTTCGT-CACCGCCCG 56410 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 ||| | | |||| || | |||| || || |||| ||||| | ||| | Sbjct 56409 AGCCCCCAGGCCGTCGAGGCTGTTATCACAGAAGCTGTCGAGATCGAAAAAGAATTCTTG 56350 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339 ||||| || || || |||| || || || | || | | || |||| |||||||| Sbjct 56349 ACCGATGCCCTTCC-TTGCGCCCTTCTCGGCATGAACTCCAAACTCATGTGCCAATACAT 56291 Query 117340 CGAGTTCGTCGCCGACAGGCTGCT 117363 |||||| |||||||||||| |||| Sbjct 56290 CGAGTTTGTCGCCGACAGGTTGCT 56267 >seq1954 Length=527115 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||||||| | ||||||||||| ||||||| ||| ||||||||||| || Sbjct 282596 GACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTGGCAAACAGCTCGAG 282655 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| |||||||| || |||||||||||||||||| |||| || || || || Sbjct 282656 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGT 282711 >seq934 Length=187681 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||||||||||||||| |||| || || ||| Sbjct 9290 ATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAGT 9349 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||| || || | ||||| ||||||||||| | |||||| Sbjct 9350 GATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 9409 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| ||| || |||||||| || || | ||||| ||| ||||||||| Sbjct 9410 CAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 9469 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| | || || || Sbjct 9470 ATTCAGAAGGAGTCAACCCTTCA 9492 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || || ||||| | || || ||| | | Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || ||||| | | ||||| ||||| || || | ||||| Sbjct 9874 GACACGATCGATAACGTTAAAACAAAAA-TCCAAGACAAGGAGGGAATTCCACCAGACCA 9932 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | ||| ||||| ||||| || || | ||||| ||| |||||||| Sbjct 9933 GCAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAA 9992 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| || |||||| | || || ||||| || | ||| || | || || Sbjct 9993 CATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGG 10040 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || || | || ||||| || || || | || |||||| || | Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| |||||| | || || ||||| ||||| | ||||| Sbjct 10102 GACACAATCGACAACG-TGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCA 10160 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||| | || || || || || || || | ||||| || |||||| || Sbjct 10161 ACAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAA 10220 Query 40869 CATCCAGAAGGA 40880 |||||||||||| Sbjct 10221 CATCCAGAAGGA 10232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515201656786240