Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq934 127 2e-24
seq1640 98.7 9e-16
seq1954 96.9 3e-15
seq2704 84.2 2e-11
>seq934
Length=187681
Score = 127 bits (140), Expect = 2e-24
Identities = 157/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || ||||||||||| || | |||||| ||| ||
Sbjct 9498 ACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCA 9439
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC-TGT 118648
|||||||| |||||| |||| | || ||||| || ||||| |||||||||||||| ||
Sbjct 9438 AGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 9379
Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
| | || || ||||| | |||| || || || ||| ||||||| || | ||||
Sbjct 9378 A--TCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTT 9321
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || ||||| || || |||||||||||
Sbjct 9320 TGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 105 bits (116), Expect = 6e-18
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
|||||||| |||||||||||||| || | | |||| ||| ||| || ||||| || |
Sbjct 10010 GTAGACTCCTTTTGAATGTTGTAGTC--TGAGAGTGTGCGACCATCTTCAAGCTGCTTGC 9953
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
| ||| | || ||||| ||||| || || || || |||||||||||| |||||| ||
Sbjct 9952 CGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGATTTTTGTTT 9893
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
|||| | |||| ||||| | || || || | || | || || ||||||| |
Sbjct 9892 TAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGG 9833
Query 118720 TTTTTACAAAAATCTGCAT 118738
| || || |||||||||||
Sbjct 9832 TCTTGACGAAAATCTGCAT 9814
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || ||||||||||| |||||||| | ||| || || || ||||| || |||
Sbjct 10268 CCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAA 10209
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || || || || ||||| | |||||||| || || || || ||
Sbjct 10208 AGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 10149
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||| ||| |||||| || || | |||| ||||| | | ||||||
Sbjct 10148 ATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACC 10089
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || |||||||||| || || ||||| || |||||
Sbjct 10088 TCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042
Score = 102 bits (112), Expect = 7e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || || || |||||||| ||||| | ||| || |||||||||||
Sbjct 9789 GTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCGAGCTG 9730
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| |||| | |||||||||||| ||||| ||||| ||||||||| || ||
Sbjct 9729 CTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTT 9670
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | |||| ||| |||| ||| || || | || | || || |||||
Sbjct 9669 GGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGT 9610
Query 118715 CAGAGTTTTTACAA 118728
||||| || ||||
Sbjct 9609 AAGAGTCTTGACAA 9596
>seq1640
Length=153026
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| ||||| || |||||||||| ||||| ||||||||||| ||||| || | ||
Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| ||||||||| || ||||| ||||| |||||||| ||| || || || | |||
Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG 9803
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| | ||| ||||||| ||| | || |||||||| || || || || ||
Sbjct 9804 ATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862
>seq1954
Length=527115
Score = 96.9 bits (106), Expect = 3e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||||||||| | ||||| |||||||||||||| |||
Sbjct 282699 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTGCCA 282640
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||| |||||||||| ||||| || || || ||||||||||||||||
Sbjct 282639 GCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCTG 282594
>seq2704
Length=633058
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/175 (72%), Gaps = 8/175 (5%)
Strand=Plus/Minus
Query 45131 GGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTC 45190
|| |||||| | || | ||| | | ||||| |||||||||||||| | | || |||
Sbjct 56322 GGCATGAACTCCAAACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTC 56263
Query 45191 -CAGTTAAAGTATCCCAAGATGTACTATACTGAGA---ACCCATTCGAGTTTATGAACAA 45246
| || ||| |||| |||||||| || || |||||||||| || ||| ||||
Sbjct 56262 GCTCTTG--GTAAT--AAGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAA 56207
Query 45247 TATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATACAAG 45301
|||||| || || || || || || |||||||| ||||||||||| ||| ||
Sbjct 56206 CATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTACCAG 56152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433815997373008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |