Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq934 127 2e-24 seq1640 98.7 9e-16 seq1954 96.9 3e-15 seq2704 84.2 2e-11 >seq934 Length=187681 Score = 127 bits (140), Expect = 2e-24 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || ||||||||||| || | |||||| ||| || Sbjct 9498 ACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCA 9439 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC-TGT 118648 |||||||| |||||| |||| | || ||||| || ||||| |||||||||||||| || Sbjct 9438 AGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 9379 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | | || || ||||| | |||| || || || ||| ||||||| || | |||| Sbjct 9378 A--TCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTT 9321 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || ||||| || || ||||||||||| Sbjct 9320 TGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599 |||||||| |||||||||||||| || | | |||| ||| ||| || ||||| || | Sbjct 10010 GTAGACTCCTTTTGAATGTTGTAGTC--TGAGAGTGTGCGACCATCTTCAAGCTGCTTGC 9953 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 | ||| | || ||||| ||||| || || || || |||||||||||| |||||| || Sbjct 9952 CGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGATTTTTGTTT 9893 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 |||| | |||| ||||| | || || || | || | || || ||||||| | Sbjct 9892 TAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGG 9833 Query 118720 TTTTTACAAAAATCTGCAT 118738 | || || ||||||||||| Sbjct 9832 TCTTGACGAAAATCTGCAT 9814 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || ||||||||||| |||||||| | ||| || || || ||||| || ||| Sbjct 10268 CCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAA 10209 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||| || || || || ||||| | |||||||| || || || || || Sbjct 10208 AGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 10149 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||| ||| |||||| || || | |||| ||||| | | |||||| Sbjct 10148 ATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACC 10089 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || |||||||||| || || ||||| || ||||| Sbjct 10088 TCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 102 bits (112), Expect = 7e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || || || |||||||| ||||| | ||| || ||||||||||| Sbjct 9789 GTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCGAGCTG 9730 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||||| ||| |||| | |||||||||||| ||||| ||||| ||||||||| || || Sbjct 9729 CTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTT 9670 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||| || | |||| ||| |||| ||| || || | || | || || ||||| Sbjct 9669 GGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGT 9610 Query 118715 CAGAGTTTTTACAA 118728 ||||| || |||| Sbjct 9609 AAGAGTCTTGACAA 9596 >seq1640 Length=153026 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||| || |||||||||| ||||| ||||||||||| ||||| || | || Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | ||||||||| || ||||| ||||| |||||||| ||| || || || | ||| Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG 9803 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||||| | ||| ||||||| ||| | || |||||||| || || || || || Sbjct 9804 ATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862 >seq1954 Length=527115 Score = 96.9 bits (106), Expect = 3e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | ||||| |||||||||||||| ||| Sbjct 282699 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTGCCA 282640 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||||||||| ||||| || || || |||||||||||||||| Sbjct 282639 GCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCTG 282594 >seq2704 Length=633058 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/175 (72%), Gaps = 8/175 (5%) Strand=Plus/Minus Query 45131 GGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTC 45190 || |||||| | || | ||| | | ||||| |||||||||||||| | | || ||| Sbjct 56322 GGCATGAACTCCAAACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTC 56263 Query 45191 -CAGTTAAAGTATCCCAAGATGTACTATACTGAGA---ACCCATTCGAGTTTATGAACAA 45246 | || ||| |||| |||||||| || || |||||||||| || ||| |||| Sbjct 56262 GCTCTTG--GTAAT--AAGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAA 56207 Query 45247 TATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATACAAG 45301 |||||| || || || || || || |||||||| ||||||||||| ||| || Sbjct 56206 CATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTACCAG 56152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433815997373008