Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq934 116 4e-21
seq1640 93.3 5e-14
>seq934
Length=187681
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| |||| ||||| || | || || ||||| |||||||||||
Sbjct 9481 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAA 9422
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | || |||||||| | || | || |||||||||| || | || || | | | |
Sbjct 9421 GATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC-TGGATCTTGGTCTTAACAT 9363
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | ||| || || || || || |||| ||||||||||||||||| || ||||| |
Sbjct 9362 TGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCA 9303
Query 43171 CAAAGATTTGCAT 43183
| || || |||||
Sbjct 9302 CGAAAATCTGCAT 9290
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || | ||| | ||| ||||| ||||| || || ||||| || || || || || |
Sbjct 10268 CCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAA 10209
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || || ||||||||||| || ||||| || || ||||| | ||
Sbjct 10208 AGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 10149
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135
| | |||||| | | || ||||||| | ||| | | | ||||| ||||| ||
Sbjct 10148 ATACCCTCCTTAT-CTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGAC 10090
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||| || || ||||| || | ||||| ||||| ||||||||
Sbjct 10089 CTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| ||||| || | || || || | || || |||||||| || |||||
Sbjct 10005 CTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAA 9946
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 43110
|| || || |||||||| | || | | |||||||| | || ||||||||| | ||
Sbjct 9945 AATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTGGATTTTTGTTTTAACGT 9887
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| ||||| || || | ||||| || || || || | ||||| |
Sbjct 9886 TATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGA 9827
Query 43171 CAAAGATTTGCAT 43183
| || || |||||
Sbjct 9826 CGAAAATCTGCAT 9814
>seq1640
Length=153026
Score = 93.3 bits (102), Expect = 5e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| |||||||| ||||| || || || |||| || |||||||| || || || |
Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTC 43112
| | ||||||||||| | || | || ||||||||| ||| | || | |||| |
Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC-TGAATCTTGCTCTTGACATTG 9800
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| ||||| |||| ||||| || ||||| || || ||||| ||
Sbjct 9801 TCGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACG 9860
Query 43173 AAG 43175
|||
Sbjct 9861 AAG 9863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571798129610720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |