Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq934 116 4e-21 seq1640 93.3 5e-14 >seq934 Length=187681 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| |||| ||||| || | || || ||||| ||||||||||| Sbjct 9481 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAA 9422 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || |||||||| | || | || |||||||||| || | || || | | | | Sbjct 9421 GATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC-TGGATCTTGGTCTTAACAT 9363 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||| || || || || || |||| ||||||||||||||||| || ||||| | Sbjct 9362 TGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCA 9303 Query 43171 CAAAGATTTGCAT 43183 | || || ||||| Sbjct 9302 CGAAAATCTGCAT 9290 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | ||| | ||| ||||| ||||| || || ||||| || || || || || | Sbjct 10268 CCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAA 10209 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || || ||||||||||| || ||||| || || ||||| | || Sbjct 10208 AGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 10149 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | |||||| | | || ||||||| | ||| | | | ||||| ||||| || Sbjct 10148 ATACCCTCCTTAT-CTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGAC 10090 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||| || || ||||| || | ||||| ||||| |||||||| Sbjct 10089 CTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| || | || || || | || || |||||||| || ||||| Sbjct 10005 CTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAA 9946 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 43110 || || || |||||||| | || | | |||||||| | || ||||||||| | || Sbjct 9945 AATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTGGATTTTTGTTTTAACGT 9887 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||||| || || | ||||| || || || || | ||||| | Sbjct 9886 TATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGA 9827 Query 43171 CAAAGATTTGCAT 43183 | || || ||||| Sbjct 9826 CGAAAATCTGCAT 9814 >seq1640 Length=153026 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| |||||||| ||||| || || || |||| || |||||||| || || || | Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTC 43112 | | ||||||||||| | || | || ||||||||| ||| | || | |||| | Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC-TGAATCTTGCTCTTGACATTG 9800 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| ||||| |||| ||||| || ||||| || || ||||| || Sbjct 9801 TCGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACG 9860 Query 43173 AAG 43175 ||| Sbjct 9861 AAG 9863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571798129610720