Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq934 107 1e-18 >seq934 Length=187681 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || |||| ||| | || || ||||| ||||||||||| || Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||| || || ||||| || | || |||||||| || Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | |||| ||| | || || || Sbjct 9396 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACC 9337 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCG 34391 || | |||||||||||||| |||||||| ||||| || |||||||||| Sbjct 9336 TCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCATCG 9288 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || || || |||| ||| || || || ||||||||||| || Sbjct 10040 CCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAG 9981 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||||||||| |||||||| || || |||||||| || Sbjct 9980 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGA 9921 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTA----GATCGGCTATCGAATCGGTCGATTC 34338 | | ||||||||| || ||||| |||| |||| |||| || | ||||| Sbjct 9920 ATTCCCTCCTTGTCTTGGAT-TTTTGTTTTAACGTTATCG---ATCGTGTCTGAAGATTC 9865 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | ||||| || || ||||| | || || || || |||||||| Sbjct 9864 AACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323061274413440