Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2528 188 6e-43 seq2704 129 5e-25 seq934 118 9e-22 seq1640 89.7 5e-13 >seq2528 Length=594046 Score = 188 bits (208), Expect = 6e-43 Identities = 427/641 (67%), Gaps = 6/641 (1%) Strand=Plus/Minus Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398 || ||||| || ||||||| | ||| || |||| ||||| || || || || || Sbjct 61380 TTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAGAGATCACGAGCT 61321 Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458 | ||| |||||||| ||| ||| || | ||||||||| || || | || | ||| Sbjct 61320 CTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAAGATATCGGAGTGC 61261 Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518 || || || || || | ||| || || || |||| |||||||| ||||| || || || Sbjct 61260 CAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACCCTGGTCAACATAG 61201 Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578 || || ||||||||| | || | ||||| || | || ||||| || | ||| | Sbjct 61200 CGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGAGGAGCCATTTGTT 61141 Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638 || || | || || | || || | ||| || | | ||| || || || | Sbjct 61140 CCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACCAATACCACCAGCT 61081 Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698 | || || |||| || || ||| || || |||||||| || ||||| || ||||| Sbjct 61080 GTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTCGATACTATCCTCC 61021 Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758 || | ||| | |||||| || | |||||| | | || || | || ||| || Sbjct 61020 TTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCCCGCGTTGAAAAGA 60961 Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818 || || ||||| || ||| || | ||||| | |||||| || || || || Sbjct 60960 GTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAGTTTCAATCGCCTTC 60901 Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 ||||||||||| ||||| ||||| | || || ||||| ||||||| || || | |||| Sbjct 60900 TCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCATGTGCTGCGGACGCTCG 60841 Query 23879 ---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAA 23935 ||| | ||| || || |||||||| || || | | || || || |||||| Sbjct 60840 GCAACCTT---GCCATTGATCCGCAACAGATAAGACCGCTCTAGTGTCTTGAAGCCAAAA 60784 Query 23936 TAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || | |||||||| |||||||||| || || ||||| || Sbjct 60783 TATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTT 60743 >seq2704 Length=633058 Score = 129 bits (142), Expect = 5e-25 Identities = 230/333 (69%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019 || || ||| || | || | || || || ||||| || ||||| || || ||| Sbjct 56604 ACTTTTGCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCT 56545 Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079 ||||| | || || ||| ||||||| || ||||| ||||| ||||| || || ||| Sbjct 56544 TTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAAT 56485 Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 || |||| || ||||||||||| ||||| ||||| ||||| || || | | ||||||| Sbjct 56484 GAACTGATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCAC 56425 Query 58140 ATT-GTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGAT 58198 || ||| | |||| | | | || || ||||||| || || |||| ||| Sbjct 56424 CTTCGTC-ACCGCCCGAGCCCCCAGGCCGTCGAGGCTGTTATCACAGAAGCTGTCGAGAT 56366 Query 58199 CGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTT 58258 |||||| || || | ||||| ||||| || ||| | ||||| |||||| | | Sbjct 56365 CGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACT 56306 Query 58259 GATGTCAAAGTACATTGAGTTTGTTGCCGACAG 58291 |||| | ||||| |||||||| |||||||| Sbjct 56305 CATGTGCCAATACATCGAGTTTGTCGCCGACAG 56273 >seq934 Length=187681 Score = 118 bits (130), Expect = 9e-22 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| || || || ||||| | || |||||| | || Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | ||||| | ||| |||||||| || | || || ||||| Sbjct 9874 GACACGATCGATAACGTTAAAACAAA-AATCCAAGACAAGGAGGGAATTCCACCAGACCA 9932 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTAT 31369 ||| |||||||| ||||| ||||| ||| | ||||| || ||| | || | || Sbjct 9933 GCAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAG--ACTAC 9990 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||| || || || || ||||| || ||| | ||| | || |||| Sbjct 9991 AACATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGGTA 10042 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253 || |||| | || |||||||| || || || || ||||| | || || || | || | Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646 Query 31254 ACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 | | |||| |||| |||| ||| | |||||||||||| | || || || ||| Sbjct 9647 ATACCATCGATAACGTGAAAACCAAGA-TCCAAGACAAGGAAGGCATCCCTCCGGATCAG 9705 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || ||||| || || ||| | || ||| |||| | ||||||||| Sbjct 9706 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAAC 9765 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || || || || ||| | || | || |||| Sbjct 9766 ATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGTA 9814 >seq1640 Length=153026 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| |||| || || || ||||| || Sbjct 9862 TTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACAATC 9803 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||||||| | || || |||||||||||| | Sbjct 9802 GACAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTTTG 9743 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || || || || ||| | || ||| || ||||||||||||| ||||| || Sbjct 9742 ATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCACCTTGAGCGATTATAATATTCAGAA 9684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445751221654080