Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 188 6e-43
seq2704 129 5e-25
seq934 118 9e-22
seq1640 89.7 5e-13
>seq2528
Length=594046
Score = 188 bits (208), Expect = 6e-43
Identities = 427/641 (67%), Gaps = 6/641 (1%)
Strand=Plus/Minus
Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398
|| ||||| || ||||||| | ||| || |||| ||||| || || || || ||
Sbjct 61380 TTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAGAGATCACGAGCT 61321
Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458
| ||| |||||||| ||| ||| || | ||||||||| || || | || | |||
Sbjct 61320 CTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAAGATATCGGAGTGC 61261
Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518
|| || || || || | ||| || || || |||| |||||||| ||||| || || ||
Sbjct 61260 CAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACCCTGGTCAACATAG 61201
Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578
|| || ||||||||| | || | ||||| || | || ||||| || | ||| |
Sbjct 61200 CGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGAGGAGCCATTTGTT 61141
Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638
|| || | || || | || || | ||| || | | ||| || || || |
Sbjct 61140 CCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGACCAATACCACCAGCT 61081
Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698
| || || |||| || || ||| || || |||||||| || ||||| || |||||
Sbjct 61080 GTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACCTTCGATACTATCCTCC 61021
Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758
|| | ||| | |||||| || | |||||| | | || || | || ||| ||
Sbjct 61020 TTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGTTCCCGCGTTGAAAAGA 60961
Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818
|| || ||||| || ||| || | ||||| | |||||| || || || ||
Sbjct 60960 GTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTAAGTTTCAATCGCCTTC 60901
Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878
||||||||||| ||||| ||||| | || || ||||| ||||||| || || | ||||
Sbjct 60900 TCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCATGTGCTGCGGACGCTCG 60841
Query 23879 ---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAA 23935
||| | ||| || || |||||||| || || | | || || || ||||||
Sbjct 60840 GCAACCTT---GCCATTGATCCGCAACAGATAAGACCGCTCTAGTGTCTTGAAGCCAAAA 60784
Query 23936 TAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
|| | |||||||| |||||||||| || || ||||| ||
Sbjct 60783 TATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTT 60743
>seq2704
Length=633058
Score = 129 bits (142), Expect = 5e-25
Identities = 230/333 (69%), Gaps = 2/333 (1%)
Strand=Plus/Minus
Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019
|| || ||| || | || | || || || ||||| || ||||| || || |||
Sbjct 56604 ACTTTTGCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCT 56545
Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079
||||| | || || ||| ||||||| || ||||| ||||| ||||| || || |||
Sbjct 56544 TTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAAT 56485
Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139
|| |||| || ||||||||||| ||||| ||||| ||||| || || | | |||||||
Sbjct 56484 GAACTGATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCAC 56425
Query 58140 ATT-GTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGAT 58198
|| ||| | |||| | | | || || ||||||| || || |||| |||
Sbjct 56424 CTTCGTC-ACCGCCCGAGCCCCCAGGCCGTCGAGGCTGTTATCACAGAAGCTGTCGAGAT 56366
Query 58199 CGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTT 58258
|||||| || || | ||||| ||||| || ||| | ||||| |||||| | |
Sbjct 56365 CGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACT 56306
Query 58259 GATGTCAAAGTACATTGAGTTTGTTGCCGACAG 58291
|||| | ||||| |||||||| ||||||||
Sbjct 56305 CATGTGCCAATACATCGAGTTTGTCGCCGACAG 56273
>seq934
Length=187681
Score = 118 bits (130), Expect = 9e-22
Identities = 168/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| |||| || || || ||||| | || |||||| | ||
Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| |||| | ||||| | ||| |||||||| || | || || |||||
Sbjct 9874 GACACGATCGATAACGTTAAAACAAA-AATCCAAGACAAGGAGGGAATTCCACCAGACCA 9932
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTAT 31369
||| |||||||| ||||| ||||| ||| | ||||| || ||| | || | ||
Sbjct 9933 GCAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAG--ACTAC 9990
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||||||| || || || || ||||| || ||| | ||| | || ||||
Sbjct 9991 AACATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGGTA 10042
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
|| |||| | || |||||||| || || || || ||||| | || || || | || |
Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646
Query 31254 ACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
| | |||| |||| |||| ||| | |||||||||||| | || || || |||
Sbjct 9647 ATACCATCGATAACGTGAAAACCAAGA-TCCAAGACAAGGAAGGCATCCCTCCGGATCAG 9705
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||| | || ||||| || || ||| | || ||| |||| | |||||||||
Sbjct 9706 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAAC 9765
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| || || || || || ||| | || | || ||||
Sbjct 9766 ATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGTA 9814
>seq1640
Length=153026
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| |||| || || || ||||| ||
Sbjct 9862 TTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACAATC 9803
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||||||| | || || |||||||||||| |
Sbjct 9802 GACAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTTTG 9743
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || || || || ||| | || ||| || ||||||||||||| ||||| ||
Sbjct 9742 ATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCACCTTGAGCGATTATAATATTCAGAA 9684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445751221654080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |