Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_003309.1
Length=53373
Score E
Sequences producing significant alignments: (Bits) Value
seq1470 91.5 5e-14
seq2541 80.6 9e-11
>seq1470
Length=2143
Score = 91.5 bits (100), Expect = 5e-14
Identities = 98/127 (77%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 44385 CCCGAGGCGCTCGTCGAAC-CTTGCGTGCTCGCCGGCAGTCGGCCGGGCGACGTCGTGTT 44443
||||||||||| | | | | ||| |||||||| ||| |||||||||||| ||| |
Sbjct 1458 CCCGAGGCGCTGCTGTATCGCGTGC-TGCTCGCCTGCACCAAGCCGGGCGACGTGGTGCT 1516
Query 44444 CGATCCGTTCTTCGGCAGCGGCACGACCGGACAAGTAGCGCAGCGCCTCGGCCGCCGTTT 44503
||||||||||||||||| |||||| ||||| || || |||||||||| |||| |
Sbjct 1517 CGATCCGTTCTTCGGCACCGGCACCACCGGTGCGGTGGCCAAGCGCCTCGGGCGCCACTG 1576
Query 44504 CATCGGC 44510
||||||
Sbjct 1577 GATCGGC 1583
>seq2541
Length=5479
Score = 80.6 bits (88), Expect = 9e-11
Identities = 49/52 (94%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 29011 AAGTGGTCGGAGCGATAGGATTCGAACCTACGACCCTCTGATCCCAAATCAG 29062
|| ||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1309 AATTGGTCGGAGCGATAGGATTCGAACCTACGACCCTCTGGTCCCAAACCAG 1258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170666479187480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |