Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 203 4e-47
seq2704 82.4 1e-10
>seq2528
Length=594046
Score = 203 bits (224), Expect = 4e-47
Identities = 590/904 (65%), Gaps = 22/904 (2%)
Strand=Plus/Minus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| |||||||| || |||||| |||| | || |||| ||||| | ||| | |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || |||| | || || || |||||||| | ||| || |||| ||||| | |||
Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 63365
||||| | | ||| |||||| ||||| | |||||| ||||| | || |
Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276
Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425
| ||||| || ||||| ||||| | || ||||| | | || || ||||| || ||
Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216
Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485
||||| || | || | ||| ||||| || | || | | ||| || || || |||||
Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156
Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATAT----TACTAATTGA 63541
|| ||||| || || | || ||| ||| ||||||| ||| ||| ||| |
Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098
Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601
|||| || || || || | || || || | ||| || ||| | ||| || |||||
Sbjct 61097 --GACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040
Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661
||||| || ||||| || |||||| | || |||||| | |||||| | | |
Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980
Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721
||||||||| || || | || ||||||||||| || || |||||| || | | |||
Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920
Query 63722 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63781
||| || ||||| || || || ||| ||||| || || || || ||||| |
Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860
Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841
||||||||| || | || ||| ||| || || ||||| || || || |
Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800
Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901
|| || || |||||||| | ||| ||| || || ||||||| |||| |||| || ||
Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740
Query 63902 CTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT----GAAATAATCGGAGAAT 63957
|| || | || |||| || || |||| || || || || || |
Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTC----GTAAGTTTTTTGAGAGATCATAGGTGCTG 60684
Query 63958 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 64017
| || || || || || || | | | ||| || || || | ||| |||
Sbjct 60683 GGCGGTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTT 60624
Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077
|||| || | ||| || || || |||| ||||||||||||||| || || ||||| || |
Sbjct 60623 TTTTCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTG 60564
Query 64078 GATG 64081
||||
Sbjct 60563 GATG 60560
Score = 107 bits (118), Expect = 2e-18
Identities = 687/1095 (63%), Gaps = 23/1095 (2%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| ||||| || || | | || || || |||||||| || ||||| ||
Sbjct 62656 GTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTTTTCAGG 62597
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| || |||||||| ||| ||||| || || | |||| | || || |
Sbjct 62596 CCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCCTTCAAG 62537
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|||||||||| |||||| || |||||||| || || | || |||||||| | |
Sbjct 62536 TGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATCTGAACA 62477
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
|| || | || | |||||||| | || ||||| | | |||||||| | || |
Sbjct 62476 ATGGTTCTCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATCCGCAGGGATA 62417
Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|| | | ||||| || || || || || | || || | ||||| || | || |
Sbjct 62416 TTGGGGATGTTCTGGATCGAACCGCCTTCAGCAATGATACGGTTCTTCATATTGTCCGAC 62357
Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402
|| | ||| | | || | || || |||||||| |||||||| || ||
Sbjct 62356 CACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGGGTTAACGACTTGGAACTCGCCT 62297
Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462
| | || | |||| || || || || || || || | | || || |||
Sbjct 62296 GCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAATCCG 62237
Query 62463 AAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
| || ||| | | || | ||||| ||||||||||| || | | ||| || | | |||
Sbjct 62236 AGGATCTGA-CTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCAGACTGTTGCGTACACC 62178
Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANN 62581
| | | ||| | | ||| || ||||||| |||||| || | || ||
Sbjct 62177 ATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGTCAGTTGGCGTCACGTT 62118
Query 62582 NNNNNNNNNATATTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATCAT 62637
||| || | | |||| | ||| || | | ||| | || || ||||
Sbjct 62117 CCACATATCATACTGCAAAGTACCCTGAGATACAGGAG----AGCCTTCGTAGGTCTCAT 62062
Query 62638 ATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62697
| || || || | || | | ||| ||| || || | | |||||| ||||
Sbjct 62061 AGGGCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCCGCATGATAAATTGTTT 62002
Query 62698 CAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG-A 62756
||||||||| |||| | | | || || || ||||||||| ||| || | |
Sbjct 62001 CAAAGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAATGGC-AATCGGAGCGCA 61943
Query 62757 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62816
| || || || || | ||||| || |||| ||||||| | ||| | ||||
Sbjct 61942 AGGAAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGATGACGGAAATTACTC 61883
Query 62817 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62876
| ||||| || | |||||| | || |||| |||||||| || ||||| | ||||
Sbjct 61882 TTGCGGGCTTCAGGGACAGGATAGTGGTTGTTATCAATAATTTTGTTCAGATTGCGGACA 61823
Query 62877 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-TCGCC-CATCTATTACAAAC- 62933
| |||| || || | || |||| ||| ||| | ||||| | | | |||
Sbjct 61822 AGAACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCGCCACGAACAGGATCAACG 61763
Query 62934 -ATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATAT 62990
|||| ||| |||| |||||||| || || || || || |||| | | | ||
Sbjct 61762 TATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTAC 61703
Query 62991 TGTATTATCTCAGTGCAAAGATTACTACACTTGA-TAGTTCCTAAATTTTGTTGATTACT 63049
| || || || ||||| || || | | | || ||||||| | |||| || || ||
Sbjct 61702 TCGATGATTTCCGTGCAGAGGTT-CGAGCTTCGAATAGTTCCAAGGTTTTTCTGGTTGCT 61644
Query 63050 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63109
||| ||| ||||||||||| ||||| ||||| || |||| || || |||||| |||
Sbjct 61643 CTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTC 61584
Query 63110 TATAATCGCTTTCCA 63124
|| || || | |||
Sbjct 61583 TAGGATGGCATACCA 61569
>seq2704
Length=633058
Score = 82.4 bits (90), Expect = 1e-10
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655
||| || |||||||| | ||| | ||| || || || ||||| || ||||| |||||
Sbjct 56455 GTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCC 56514
Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715
|||||| || ||||| || || || || || || || || ||||| || || || ||
Sbjct 56515 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCCTCAACGGC 56574
Query 33716 AGCAAAGGCAATAAG 33730
|||||||||| |||
Sbjct 56575 TGCAAAGGCAACAAG 56589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629796154710720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |