Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2071 111 1e-19 seq2374 86.0 5e-12 >seq2071 Length=31734 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062 || ||||||| | ||| || || ||||||||||||||||| ||||| || || ||| Sbjct 11538 TGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAG 11597 Query 21063 ATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGA 21122 |||||||| | ||||||||||||||| ||||||| || || ||||| ||||| Sbjct 11598 ATGTCGGCACTGCGCTGGTACAGCTGGCACGACAGCTTGCCGTCCGCGACGTAGAACTGG 11657 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCAC 21182 | || |||| || || | || |||||| || || |||||| |||||| |||| Sbjct 11658 AAGAACGCGTGGCAGGGCGCCAGCGCCATCTTCGGGATGTCCGCCACGTTCCAGGCGCTG 11717 Query 21183 ATAACGATGCGCCG 21196 | | |||||| || Sbjct 11718 ACGATGATGCGGCG 11731 >seq2374 Length=591842 Score = 86.0 bits (94), Expect = 5e-12 Identities = 163/231 (71%), Gaps = 12/231 (5%) Strand=Plus/Plus Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 ||| |||||||| | |||| | ||||| || ||||| |||||| | || ||||| | Sbjct 120148 CACATAAAACTG-CGCAAACATATGACACGGCGGGAGCGCCATCTTCTTCAGATCCGCCG 120206 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGG--CCGCCTGTTAATTAGATC--C 21224 |||||||||||| || | ||| |||| ||| | ||| | ||| | || | || | Sbjct 120207 GGTTCCACGCGCTCAGGATGATCCGCCTATCATAGGGATTCTCCT-TCAACT---TCCGC 120262 Query 21225 ACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283 ||||| | ||| | ||| ||||| |||| ||| | || | | | || || || Sbjct 120263 ACCACCT-CCGCGATCTGATCCACACCCTTTCCCGCATAATCCGTCTTCGCATCCACATA 120321 Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 ||| || ||||| || | ||| ||||||||||| || || ||||||||||| Sbjct 120322 CTCTGCACCAAAGTGACGCCATTGGAACCCGTAGACGGGGCCCAGATCGCC 120372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427761798371520