Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq934 107 2e-18
seq1640 105 7e-18
seq2704 98.7 1e-15
>seq934
Length=187681
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || ||||| | ||| || ||||| | |||| || || || |||||||| |||
Sbjct 10269 GCCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGA 10210
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| |||| ||||| || || ||||||||| | || |||||||| || || || ||
Sbjct 10209 AAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGG 10150
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || || || ||||||| || | | || | |||||| | || || ||
Sbjct 10149 GATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGAC 10090
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| | || | |||||||||||||| || || || ||||||||||||
Sbjct 10089 CTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCATA 10041
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|||||||| ||||||||||| || || | ||||| ||||| ||||| || ||
Sbjct 10010 GTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 9951
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| | || ||||||||||| || || || || || || ||||| || ||||||||||
Sbjct 9950 GCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTC-TTGGATTTTTGTTTT 9892
Query 139688 AGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | | || | ||||| | | || || |||| || | ||||| |||||||| ||
Sbjct 9891 AACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGT 9832
Query 139747 TTTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 9831 CTTGACGAAAATCTGCATA 9813
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | || | ||| ||||||| || ||||| || |||||||| || ||
Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| |||||||||||||| |||||| |||||||| || |||||
Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| || | || || ||| | | || | || || ||| ||| ||
Sbjct 9396 ATGCCCTCCTTGTC-CTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAAC 9338
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | || | || ||||| || | || || ||||| || |||||
Sbjct 9337 CTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
>seq1640
Length=153026
Score = 105 bits (116), Expect = 7e-18
Identities = 133/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636
|| ||||| ||||||||||||| |||| ||| |||||||| || || ||| | |||
Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743
Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTC 139695
| ||| ||||| || ||||| |||||||| ||||| ||| | || | || | | ||
Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTC-CTGAATCTTGCTCTTGACATTGTC 9802
Query 139696 CACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755
| ||||||| | | ||||||||| | ||| | ||||||||||| | || || |||||
Sbjct 9803 GATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862
>seq2704
Length=633058
Score = 98.7 bits (108), Expect = 1e-15
Identities = 338/518 (65%), Gaps = 13/518 (3%)
Strand=Plus/Minus
Query 52549 GTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCC 52608
||||| || | || || |||| ||||||||| | ||||||| || || | || |
Sbjct 56664 GTTCCTTGCATCCGTAAGAAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAATCA 56605
Query 52609 ACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGT 52668
||||||||| | || || || || ||||| || || ||| | ||||| || |
Sbjct 56604 ACTTTTGCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCT 56545
Query 52669 TTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAA 52727
||||| | || || | | || || | ||| | || |||| |||||||| || |||
Sbjct 56544 TTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTTA-TGCCTGGCCTCACCTTCTCCAA 56486
Query 52728 CGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGT-TTGTATTATAATA 52786
|| |||| || |||||||| || | ||||| || ||||| ||| || | || | |
Sbjct 56485 TGAACTGATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCA 56426
Query 52787 CGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAGACATGTTT--AAAGAGGCCGT 52844
| ||| | | | | | || || | |||| | ||| || ||
Sbjct 56425 CCTTCGTCACCGCCCGAGCCCCC-----AGGCCGTCGAGGC-TGTTATCACAGAAGCTGT 56372
Query 52845 CGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGC 52904
||| || |||||||| || || || || || | || | | | ||||||||| |
Sbjct 56371 CGAGATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTC 56312
Query 52905 GACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG-TTGATGCAGCTCGGTC 52963
| | |||||| | |||||||||||||| || ||||| || ||| || || |||
Sbjct 56311 CAAACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCGCT-CTTGGTA 56253
Query 52964 AGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGG 53023
| ||| |||||||||||| ||||| || || ||| ||||||| ||||| |
Sbjct 56252 ATAAGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCG 56193
Query 53024 GCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
| || |||||||| || |||| || || ||||| |||
Sbjct 56192 GTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTAC 56155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496047109020800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |