Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2528 212 9e-50 seq2704 105 1e-17 >seq2528 Length=594046 Score = 212 bits (234), Expect = 9e-50 Identities = 589/900 (65%), Gaps = 14/900 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || |||||||| || ||||||| | || || || || | ||||| | ||| | | Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | | || || || |||||||| | ||| || |||| ||||| | ||| Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 80037 ||||| | | ||| ||||| ||||| | |||||| ||||| | || | Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | ||||| || ||||| ||||| | || ||||| | | || |||||||| || || Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 ||||| || | || | ||| ||||| || | || | | ||| || || || || || Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156 Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT----TACTAATTGA 80213 || | ||||| || || | || ||| ||| ||||||| ||| ||| ||| | Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 |||| || || || || | || || || | ||| || ||| | |||||| ||||| Sbjct 61097 --GACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 || || || ||||| || |||||| | || |||||| | |||||| | | Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 ||||||||| || || | || ||||||||||| || || |||||| |||| | ||| Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| || ||||| || || || ||| ||||| || ||||| || ||||| | Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 ||||||||| || | || | | |||| ||| || ||||| ||||| || | Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800 Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || || |||||||| | ||| ||| || || ||||||| |||| ||||||| || Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740 Query 80574 TTTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTT 80633 | || | || |||| | || || | || || || || | | Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTCGTAAGTTTTTTGAGAGATCATAGGTGCTGGGCG 60680 Query 80634 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 80693 || || || || || || | | | ||| || || || | ||| ||||||| Sbjct 60679 GTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTTTTTT 60620 Query 80694 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || | ||| || || || |||||||||||||||||||| | || ||||| |||||||| Sbjct 60619 CGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTGGATG 60560 Score = 154 bits (170), Expect = 2e-32 Identities = 704/1097 (64%), Gaps = 27/1097 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| ||||| || || | | || || || |||||||| || ||||| || Sbjct 62656 GTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTTTTCAGG 62597 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || |||||||| || ||||| || || | |||| | || || | Sbjct 62596 CCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCCTTCAAG 62537 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 |||||||||| |||||| || |||||||| || || | || |||||||| | | Sbjct 62536 TGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATCTGAACA 62477 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || | || | |||||||| | || ||||| | | |||||||| | || | Sbjct 62476 ATGGTTCTCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATCCGCAGGGATA 62417 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | | ||||| || || || || || || || || | ||||| || | || | Sbjct 62416 TTGGGGATGTTCTGGATCGAACCGCCTTCAGCAATGATACGGTTCTTCATATTGTCCGAC 62357 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | ||| | | || | || || || ||||| ||||| || || || Sbjct 62356 CACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGGGTTAACGACTTGGAACTCGCCT 62297 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | |||| || || || || ||||| || | |||| || ||| Sbjct 62296 GCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAATCCG 62237 Query 79135 AAAATTTGAGCAGTTGAT-GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 | || ||| | | || | || |||||||||||||| || | | ||| || | | ||| Sbjct 62236 AGGATCTGA-CTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCAGACTGTTGCGTACACC 62178 Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 | | ||| | | ||| || | |||||||||||||| |||| || || || Sbjct 62177 ATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGTCAGTTGGCGTCACGTT 62118 Query 79254 CCAAAGATCATATTGTAGAATACCGTTAC-TAGCGTATGATCCTGTGTATGTTTCATAAG 79312 ||| | |||||| || | | |||| | | || | | || ||| ||| || ||||| | Sbjct 62117 CCACATATCATACTGCAAAGTACCCTGAGATACAGGA-GAGCCTTCGTAGGTCTCATAGG 62059 Query 79313 GTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 | || || || ||| | || ||| ||| || || | | |||||| ||||| | Sbjct 62058 GCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCCGCATGATAAATTGTTTCAA 61999 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG-AATA 79431 | |||| |||| | | | || || | ||||||||| ||| || | || Sbjct 61998 AGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAATGGC-AATCGGAGCGCAAGG 61940 Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491 || || || || | ||||| || |||| ||||||| | ||| | |||| | Sbjct 61939 AAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGATGACGGAAATTACTCTTG 61880 Query 79492 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 ||||| || | |||||| | || |||| |||||||| || ||||| | ||| | Sbjct 61879 CGGGCTTCAGGGACAGGATAGTGGTTGTTATCAATAATTTTGTTCAGATTGCGGACAAGA 61820 Query 79552 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTCCATCTATTACA-----AAC 79605 |||| || || | | |||| ||| ||| | ||| ||| | | ||| ||| Sbjct 61819 ACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCG-CCA-CGA--ACAGGATCAAC 61764 Query 79606 --ATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 79661 |||| ||| || | |||||||| || ||||| || || |||| | | | || Sbjct 61763 GTATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTA 61704 Query 79662 TTGTATTATTTCAGTGCAGAGGTTACTACACTT--AATGGTTCCTAAATTTTGTTGATTA 79719 | || ||||| ||||||||||| | | ||| ||| ||||| | |||| || || Sbjct 61703 CTCGATGATTTCCGTGCAGAGGTT-CGAG-CTTCGAATAGTTCCAAGGTTTTTCTGGTTG 61646 Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779 ||||| ||| ||||||||||| ||||| |||||||| |||| || || |||||| | Sbjct 61645 CTCTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCT 61586 Query 79780 TCTATAATCGCTTTCCA 79796 |||| || || | ||| Sbjct 61585 TCTAGGATGGCATACCA 61569 >seq2704 Length=633058 Score = 105 bits (116), Expect = 1e-17 Identities = 143/196 (73%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||| || |||||||| | ||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 56455 GTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCC 56514 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || ||||| || || || ||||| || ||| || ||||| || || || || Sbjct 56515 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCCTCAACGGC 56574 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCA-CTTTTGAG 50149 |||||||||||||| | || || || | | | ||| || ||||| | || | Sbjct 56575 TGCAAAGGCAACAAGGCGCTGGGCAAAAGTTGATTCCTGGTCTTGGATCCATCGAATG-G 56633 Query 50150 CCCAATCGGCCTTCTT 50165 ||||||| |||||||| Sbjct 56634 CCCAATCAGCCTTCTT 56649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718244342947360