Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 205 1e-47
seq2704 95.1 2e-14
>seq2528
Length=594046
Score = 205 bits (226), Expect = 1e-47
Identities = 586/897 (65%), Gaps = 8/897 (1%)
Strand=Plus/Minus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
|| |||||||| || || ||| | || || || ||||| ||||| | ||| | |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
|| || || | | | || || |||||||| | ||| || |||| ||||| | |||
Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 72120
||||| | | ||| ||||| ||||| | |||||| ||||| | || |
Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276
Query 72121 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCT 72180
| ||||| || ||||| ||||| | || ||||| | | || || ||||| || ||
Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216
Query 72181 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 72240
||||| || | || | ||| ||||| || | || | | ||| || || || || ||
Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156
Query 72241 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGC-TAATTGATAG 72299
|| | ||||| || || | || ||| ||| ||||||| ||| | || | | ||
Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTA-AG 61097
Query 72300 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 72359
||| || || || || | || || || | ||| || ||| | |||||| ||||| ||
Sbjct 61096 ACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACC 61037
Query 72360 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 72419
|| |||||||| ||| |||||| | || |||||| | |||||| | | |||
Sbjct 61036 TTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGT 60977
Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 72479
|||||| || || | || ||||||||||| || || |||||| |||| | ||||||
Sbjct 60976 TCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTA 60917
Query 72480 CGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACAT 72539
|| ||||| || || || ||| || || || ||||| || ||||| | |||
Sbjct 60916 AGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCAT 60857
Query 72540 ATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGT 72599
||||| || | || | | |||| ||| || ||||| || || || | ||
Sbjct 60856 GTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTGT 60797
Query 72600 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTT 72659
|| || |||||||| | ||| ||| || || ||||||| |||| |||| || || |
Sbjct 60796 CTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAGCTC 60737
Query 72660 ATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCC 72719
|| | || |||| || || || | || || || || | |
Sbjct 60736 GTCAGCGTGCTTCATAACAATTTCGTAAGTTTTTTGAGAGATCATAGGTGCTGGGCGGTT 60677
Query 72720 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 72779
|| || || || || || | | | ||| || || || | ||| ||||||| ||
Sbjct 60676 GTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTTTTTTCGT 60617
Query 72780 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
| ||| || || || |||||||||||||||||||| || || ||||| ||||||||
Sbjct 60616 CTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTGGATG 60560
>seq2704
Length=633058
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138
||| || ||||| || | ||| | ||| ||||| || ||||| || ||||| |||||
Sbjct 56455 GTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCC 56514
Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198
|||||| || ||||| || ||||| ||||| || ||| || ||||| || || || ||
Sbjct 56515 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCCTCAACGGC 56574
Query 42199 CGCAAAGGCAATAAG 42213
|||||||||| |||
Sbjct 56575 TGCAAAGGCAACAAG 56589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671116347710240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |