Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq2704 98.7 1e-15
seq934 98.7 1e-15
>seq2704
Length=633058
Score = 98.7 bits (108), Expect = 1e-15
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 50627 TCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGT 50686
||| |||||| ||||| ||||||||||| || || || || || | || || |
Sbjct 56384 TCACAGAAGCTGTCGAGATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTC 56325
Query 50687 TGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTG 50745
| ||||||||| | | | |||||| | ||||| |||||||| || ||||| ||| |||
Sbjct 56324 TCGGCATGAACTCCAAACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTG 56265
Query 50746 TTGCAGCTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAA 50804
| || || || | ||| ||||||||||| ||| ||||| || || ||| | ||
Sbjct 56264 TCGC-TCTTGGTAATAAGAAGTACTATAATGCGACG-AACCCATTCGACTTCATGGACAA 56207
Query 50805 CATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856
||| ||| || || || |||||||| || || | || || ||||| |||
Sbjct 56206 CATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTAC 56155
>seq934
Length=187681
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || ||||| | ||| || || || | ||| ||| || || ||||| || |||
Sbjct 10269 GCCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGA 10210
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| |||| ||||| ||||| ||||||||| | || |||||||| || || || ||
Sbjct 10209 AAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGG 10150
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| || || || || |||||| || | | || | ||||| | || ||| ||
Sbjct 10149 GATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGAC 10090
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||||||||||||||| || || ||||||||||||
Sbjct 10089 CTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCATA 10041
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
||||| || ||||| |||||||| || | ||||| ||||| || || || ||
Sbjct 10010 GTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 9951
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| | || ||||||||||| || || || || || || ||||| | ||||||||||
Sbjct 9950 GCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTC-TTGGATTTTTGTTTT 9892
Query 143108 AGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
| | | || | |||||| | | ||| ||||||| || | ||||| |||||||| ||
Sbjct 9891 AACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGT 9832
Query 143167 TTTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 9831 CTTGACGAAAATCTGCATA 9813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506997136159680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |