Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2704 98.7 1e-15 seq934 98.7 1e-15 >seq2704 Length=633058 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 50627 TCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGT 50686 ||| |||||| ||||| ||||||||||| || || || || || | || || | Sbjct 56384 TCACAGAAGCTGTCGAGATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTC 56325 Query 50687 TGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTG 50745 | ||||||||| | | | |||||| | ||||| |||||||| || ||||| ||| ||| Sbjct 56324 TCGGCATGAACTCCAAACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTG 56265 Query 50746 TTGCAGCTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAA 50804 | || || || | ||| ||||||||||| ||| ||||| || || ||| | || Sbjct 56264 TCGC-TCTTGGTAATAAGAAGTACTATAATGCGACG-AACCCATTCGACTTCATGGACAA 56207 Query 50805 CATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 ||| ||| || || || |||||||| || || | || || ||||| ||| Sbjct 56206 CATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTAC 56155 >seq934 Length=187681 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || ||||| | ||| || || || | ||| ||| || || ||||| || ||| Sbjct 10269 GCCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGA 10210 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| ||||| ||||| ||||||||| | || |||||||| || || || || Sbjct 10209 AAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGG 10150 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || || || |||||| || | | || | ||||| | || ||| || Sbjct 10149 GATACCCTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGAC 10090 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||||||||||||||| || || |||||||||||| Sbjct 10089 CTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCATA 10041 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || ||||| |||||||| || | ||||| ||||| || || || || Sbjct 10010 GTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 9951 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || | || ||||||||||| || || || || || || ||||| | |||||||||| Sbjct 9950 GCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTC-TTGGATTTTTGTTTT 9892 Query 143108 AGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | | || | |||||| | | ||| ||||||| || | ||||| |||||||| || Sbjct 9891 AACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGT 9832 Query 143167 TTTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 9831 CTTGACGAAAATCTGCATA 9813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506997136159680