Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2704 109 8e-19 >seq2704 Length=633058 Score = 109 bits (120), Expect = 8e-19 Identities = 338/518 (65%), Gaps = 25/518 (5%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || ||||| |||||| | |||| ||||| |||||| | ||| | | || | | ||| Sbjct 56655 ATCCGTAAGAAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAATCAACTTTTGCC 56596 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || || || ||||| ||||| ||||| || || |||||| | Sbjct 56595 CAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCT 56536 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||||| |||||||| || || ||||| || || || | || || | || Sbjct 56535 ATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATT 56476 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597 || || ||||||||||| ||| |||||||||| ||| || || || || || || Sbjct 56475 TCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCTTCGTCAC 56416 Query 125598 CGTCCCGAGTGCAGATCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655 || |||||| | |||| || || || ||| || || || || Sbjct 56415 CG-CCCGAGCCC----CCAGGCCGTCGAGGCTGTTATC---------ACAGAAGCTGTCG 56370 Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715 ||| ||| |||| || | ||||| |||| || | | | | |||||||||| || Sbjct 56369 AGATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCA 56310 Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC 125775 | || |||||| | ||||| |||||||| || || | | || || |||| Sbjct 56309 AACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCG---CTCTTGGTA 56253 Query 125776 GCAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832 |||| ||| || || | ||| || || || |||||| || ||| || || | Sbjct 56252 ATAAGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCG 56193 Query 125833 GTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||| ||||| || |||||| ||| |||| ||| Sbjct 56192 GTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTAC 56155 Score = 105 bits (116), Expect = 1e-17 Identities = 185/267 (69%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| || || |||| ||||| ||||| | ||||||| |||| ||| Sbjct 57059 ATCTGGCAAATGTACAAGAAAGCAGAGGCATCCTTCTGGACTGCCGAAGAGATCGACCTG 57000 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | || ||| ||| ||| || | || || || Sbjct 56999 TCGAAGGATCTTCACGACTGGAACCACCGACTGAATGACGATGAACGCTACTTCATCTCT 56940 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 | | | ||||||||||| || | |||||||| || ||||| || || | ||| || ||| Sbjct 56939 CGCGTCTTGGCCTTCTTCGCTGCTTCCGATGGTATTGTCAATGAGAACCTTGTCGA-ACG 56881 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | || | || || || | ||||| || || ||||| |||||||| Sbjct 56880 CTTCAGTGGTGAAGTCCAAATCCCGGAAGCCCGATGCTTCTATGGCTTCCAGATCATGAT 56821 Query 125258 TGAGAACGTGCACTCGGAAATGTACTC 125284 || ||| | ||||| || | ||||| Sbjct 56820 GGAAAACATTCACTCCGAGACTTACTC 56794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741033966934240