Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2704 109 8e-19
>seq2704
Length=633058
Score = 109 bits (120), Expect = 8e-19
Identities = 338/518 (65%), Gaps = 25/518 (5%)
Strand=Plus/Minus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| ||||| |||||| | |||| ||||| |||||| | ||| | | || | | |||
Sbjct 56655 ATCCGTAAGAAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAATCAACTTTTGCC 56596
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | || || || || || ||||| ||||| ||||| || || |||||| |
Sbjct 56595 CAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCT 56536
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||| |||||||| || || ||||| || || || | || || | ||
Sbjct 56535 ATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATT 56476
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597
|| || ||||||||||| ||| |||||||||| ||| || || || || || ||
Sbjct 56475 TCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCTTCGTCAC 56416
Query 125598 CGTCCCGAGTGCAGATCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGA 125655
|| |||||| | |||| || || || ||| || || || ||
Sbjct 56415 CG-CCCGAGCCC----CCAGGCCGTCGAGGCTGTTATC---------ACAGAAGCTGTCG 56370
Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715
||| ||| |||| || | ||||| |||| || | | | | |||||||||| ||
Sbjct 56369 AGATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCA 56310
Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC 125775
| || |||||| | ||||| |||||||| || || | | || || ||||
Sbjct 56309 AACTCATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCG---CTCTTGGTA 56253
Query 125776 GCAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832
|||| ||| || || | ||| || || || |||||| || ||| || || |
Sbjct 56252 ATAAGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCG 56193
Query 125833 GTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||| ||||| || |||||| ||| |||| |||
Sbjct 56192 GTAAGACAAACTTCTTTGAGAAGCGCGTCGGCGACTAC 56155
Score = 105 bits (116), Expect = 1e-17
Identities = 185/267 (69%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| || || |||| ||||| ||||| | ||||||| |||| |||
Sbjct 57059 ATCTGGCAAATGTACAAGAAAGCAGAGGCATCCTTCTGGACTGCCGAAGAGATCGACCTG 57000
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | || ||| ||| ||| || | || || ||
Sbjct 56999 TCGAAGGATCTTCACGACTGGAACCACCGACTGAATGACGATGAACGCTACTTCATCTCT 56940
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197
| | | ||||||||||| || | |||||||| || ||||| || || | ||| || |||
Sbjct 56939 CGCGTCTTGGCCTTCTTCGCTGCTTCCGATGGTATTGTCAATGAGAACCTTGTCGA-ACG 56881
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| | || | || || || | ||||| || || ||||| ||||||||
Sbjct 56880 CTTCAGTGGTGAAGTCCAAATCCCGGAAGCCCGATGCTTCTATGGCTTCCAGATCATGAT 56821
Query 125258 TGAGAACGTGCACTCGGAAATGTACTC 125284
|| ||| | ||||| || | |||||
Sbjct 56820 GGAAAACATTCACTCCGAGACTTACTC 56794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741033966934240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |