Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_004681.1
Length=75931
Score E
Sequences producing significant alignments: (Bits) Value
seq1406 214 9e-51
seq183 194 8e-45
seq665 168 3e-37
seq121 134 7e-27
>seq1406
Length=1376
Score = 214 bits (236), Expect = 9e-51
Identities = 356/511 (70%), Gaps = 5/511 (1%)
Strand=Plus/Plus
Query 66608 GCCCTGGCCGAGGTCGATAAACGC-TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAA 66666
||||| || || ||||| ||| |||||| || ||||| |||||||| || | ||
Sbjct 808 GCCCTCGCGCAGATCGATCG-CGCGTTCGGCAAGGGCTCGGCAATGAAGCTCGGCCAGAA 866
Query 66667 GC---CACAGACTGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGG 66723
| | || || || ||| | | |||||| ||| || ||| ||| || ||
Sbjct 867 GGAGGCGATGAAGGTCGAGGTCGTCTCGACCGGCAGCCTCGGGCTCGACATCGCGCTCGG 926
Query 66724 CATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAA 66783
| |||| || || | |||||| | || || |||| |||||| ||||| || || ||
Sbjct 927 CGTCGGCGGCCTGCCCAAGGGCCGTATCGTCGAGATCTTCGGCCCCGAATCCTCGGGCAA 986
Query 66784 GTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTA 66843
| | || || ||||||||| | ||| | |||| ||||| || |||| ||| || |
Sbjct 987 GACGACGCTCGCGCTCCACGCGATCGCCGAATCGCAAAAGGCTGGCGGCACCGCGGCGTT 1046
Query 66844 CATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66903
| ||||||| |||||| | || || |||| || |||||| ||| || || || ||||
Sbjct 1047 CGTCGACGCCGAGCACGCGCTCGATCCCGCTTATGCCAAGAAGCTGGGCGTCAACATCGA 1106
Query 66904 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66963
| | || | || ||||| || || ||||||||||| || |||||||| ||| ||
Sbjct 1107 CGAACTGATCGTCTCGCAGCCCGATACCGGCGAGCAGGCGCTTGAGATCGTCGACACGCT 1166
Query 66964 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 67023
|||| || || | | | | | || || || || || || || || ||||||||
Sbjct 1167 CGTCCGCTCGAACGCGATCGACGTGCTGGTGGTCGATTCGGTCGCCGCGCTCGTGCCGCG 1226
Query 67024 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 67083
|||||| |||| ||||| || || ||||| ||||||||||| || |||||||| |||
Sbjct 1227 CGCCGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTTCAGGCGCGCCTGATGAG 1286
Query 67084 GCAGGCCATGCGCAAGCTCACTGGCACCATC 67114
||||| |||||||||| || ||||| |||
Sbjct 1287 CCAGGCGCTGCGCAAGCTTACCGGCACGATC 1317
>seq183
Length=814
Score = 194 bits (214), Expect = 8e-45
Identities = 295/417 (71%), Gaps = 10/417 (2%)
Strand=Plus/Minus
Query 66690 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66749
|||||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| |
Sbjct 412 CCACCGGCTCGCTGGGGCTGGACGTCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 353
Query 66750 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66809
|| | || ||||||||||| ||||| ||||| ||| | || ||| || || | | |
Sbjct 352 TGATCGAGATCTACGGCCCGGAATCGTCAGGCAAGACCACGCTGACGCTGCAGGTCATCG 293
Query 66810 CCAATGCGCAGA---AGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGG 66866
|| | |||| ||||||| || | ||||| | ||||||| |||||| | ||||
Sbjct 292 CCGAGATGCAGCGCCAGGCCGG---CACCTGCGCCTTCGTCGACGCCGAGCACGCGCTGG 236
Query 66867 ACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 66926
|| || ||||||| || ||| || || |||| | | || || | |||||||
Sbjct 235 ACACCCAGTACGCGCAGAAGCTGGGCGTCAACCTGCAGGAGCTGCTGATCAGCCAGCCGG 176
Query 66927 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC-- 66984
|||| ||||||||||| ||||||||||| ||| ||| || || ||| || |||
Sbjct 175 ACACCGGCGAGCAGGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGC--GCCGTCGA 118
Query 66985 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 67044
| | ||||| | ||||| |||||||| |||||||| |||||| |||| ||||| ||
Sbjct 117 CCTGATCGTCATCGACTCGGTGGCGGCGCTGGTGCCCAAGGCCGAGATCGAGGGCGAGAT 58
Query 67045 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCT 67101
|| || | ||||||||| || ||||||||| ||||| ||||||||||
Sbjct 57 GGGCGATTCGCTGCCCGGCCTGCAGGCCCGCCTCATGAGCCAGGCGCTGCGCAAGCT 1
>seq665
Length=19784
Score = 168 bits (186), Expect = 3e-37
Identities = 274/391 (70%), Gaps = 5/391 (1%)
Strand=Plus/Plus
Query 67085 CAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTC 67144
||||| ||||||||||||| | ||| ||| | |||||| || ||| ||
Sbjct 7 CAGGCGCTGCGCAAGCTCACCGCCACGATCAAGAAGACCAACTGCATGGTCATCTTCATC 66
Query 67145 AACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGC 67204
|||||| | ||| |||||||||| || | | |||| ||||||||||| |||
Sbjct 67 AACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCC---GAGACCACCACCGGC 123
Query 67205 GGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAG 67264
|| || || ||| ||||||||| || || ||| |||| |||| |||| || ||||
Sbjct 124 GGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCATC 183
Query 67265 AAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTG 67324
||| | ||||| ||||| |||||||| ||| ||| || ||||||||||||||| ||
Sbjct 184 AAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTG 243
Query 67325 GCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAG 67384
|| || ||| | | || |||||| | || ||| ||| |||||||||||||| ||
Sbjct 244 GCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCGAA 303
Query 67385 GTCGAACTCCTCGACCTGGCCGT-GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 67443
| ||| || ||||| ||| ||| ||| || | | ||||||| ||||||||||
Sbjct 304 GGCGAGGTCATCGACATGGGCGTCAACGC-CCGCATCATCGAGAAGTCCGGCGCCTGGTA 362
Query 67444 CAAGTACGGGGACAAGAACGTCGCTCAGGGC 67474
| ||| || | |||| ||| ||||||
Sbjct 363 CGCCTACAAGGGCGAGAAGATCGGCCAGGGC 393
>seq121
Length=664
Score = 134 bits (148), Expect = 7e-27
Identities = 206/293 (70%), Gaps = 3/293 (1%)
Strand=Plus/Plus
Query 67159 GAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAG 67218
|||||||||| ||| |||||| || || || || || ||||| || || |||
Sbjct 7 GAAGATCGGC---GTGATGTACGGCTCGCCCGAAACGACGACCGGCGGCAATGCGCTGAA 63
Query 67219 GTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGA 67278
|||||||| || ||||| | || || || ||||||| | | | ||||| |||| ||
Sbjct 64 ATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATCGGCTCGGTCAAGGACCGCGAGGA 123
Query 67279 GGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 67338
|| |||||||| ||||| ||||| || || ||||||||| | || |||||| |
Sbjct 124 AGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAGAACAAGGTCGCGCCGCCGTTCAA 183
Query 67339 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGA 67398
| | ||| ||| | || ||| ||| |||||||| || || ||| || ||||
Sbjct 184 GCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATTTCCAAGCTGGGCGAGATCATCGA 243
Query 67399 CCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 67451
||| | |||| | |||||||| ||||||||||| ||||||||| ||||
Sbjct 244 CCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGCTCCTGGTTCAGCTACG 296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242846337537488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |