Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq1406 214 9e-51 seq183 194 8e-45 seq665 168 3e-37 seq121 134 7e-27 >seq1406 Length=1376 Score = 214 bits (236), Expect = 9e-51 Identities = 356/511 (70%), Gaps = 5/511 (1%) Strand=Plus/Plus Query 66608 GCCCTGGCCGAGGTCGATAAACGC-TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAA 66666 ||||| || || ||||| ||| |||||| || ||||| |||||||| || | || Sbjct 808 GCCCTCGCGCAGATCGATCG-CGCGTTCGGCAAGGGCTCGGCAATGAAGCTCGGCCAGAA 866 Query 66667 GC---CACAGACTGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGG 66723 | | || || || ||| | | |||||| ||| || ||| ||| || || Sbjct 867 GGAGGCGATGAAGGTCGAGGTCGTCTCGACCGGCAGCCTCGGGCTCGACATCGCGCTCGG 926 Query 66724 CATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAA 66783 | |||| || || | |||||| | || || |||| |||||| ||||| || || || Sbjct 927 CGTCGGCGGCCTGCCCAAGGGCCGTATCGTCGAGATCTTCGGCCCCGAATCCTCGGGCAA 986 Query 66784 GTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTA 66843 | | || || ||||||||| | ||| | |||| ||||| || |||| ||| || | Sbjct 987 GACGACGCTCGCGCTCCACGCGATCGCCGAATCGCAAAAGGCTGGCGGCACCGCGGCGTT 1046 Query 66844 CATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66903 | ||||||| |||||| | || || |||| || |||||| ||| || || || |||| Sbjct 1047 CGTCGACGCCGAGCACGCGCTCGATCCCGCTTATGCCAAGAAGCTGGGCGTCAACATCGA 1106 Query 66904 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66963 | | || | || ||||| || || ||||||||||| || |||||||| ||| || Sbjct 1107 CGAACTGATCGTCTCGCAGCCCGATACCGGCGAGCAGGCGCTTGAGATCGTCGACACGCT 1166 Query 66964 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 67023 |||| || || | | | | | || || || || || || || || |||||||| Sbjct 1167 CGTCCGCTCGAACGCGATCGACGTGCTGGTGGTCGATTCGGTCGCCGCGCTCGTGCCGCG 1226 Query 67024 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 67083 |||||| |||| ||||| || || ||||| ||||||||||| || |||||||| ||| Sbjct 1227 CGCCGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTTCAGGCGCGCCTGATGAG 1286 Query 67084 GCAGGCCATGCGCAAGCTCACTGGCACCATC 67114 ||||| |||||||||| || ||||| ||| Sbjct 1287 CCAGGCGCTGCGCAAGCTTACCGGCACGATC 1317 >seq183 Length=814 Score = 194 bits (214), Expect = 8e-45 Identities = 295/417 (71%), Gaps = 10/417 (2%) Strand=Plus/Minus Query 66690 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66749 |||||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| | Sbjct 412 CCACCGGCTCGCTGGGGCTGGACGTCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 353 Query 66750 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66809 || | || ||||||||||| ||||| ||||| ||| | || ||| || || | | | Sbjct 352 TGATCGAGATCTACGGCCCGGAATCGTCAGGCAAGACCACGCTGACGCTGCAGGTCATCG 293 Query 66810 CCAATGCGCAGA---AGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGG 66866 || | |||| ||||||| || | ||||| | ||||||| |||||| | |||| Sbjct 292 CCGAGATGCAGCGCCAGGCCGG---CACCTGCGCCTTCGTCGACGCCGAGCACGCGCTGG 236 Query 66867 ACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 66926 || || ||||||| || ||| || || |||| | | || || | ||||||| Sbjct 235 ACACCCAGTACGCGCAGAAGCTGGGCGTCAACCTGCAGGAGCTGCTGATCAGCCAGCCGG 176 Query 66927 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC-- 66984 |||| ||||||||||| ||||||||||| ||| ||| || || ||| || ||| Sbjct 175 ACACCGGCGAGCAGGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGC--GCCGTCGA 118 Query 66985 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 67044 | | ||||| | ||||| |||||||| |||||||| |||||| |||| ||||| || Sbjct 117 CCTGATCGTCATCGACTCGGTGGCGGCGCTGGTGCCCAAGGCCGAGATCGAGGGCGAGAT 58 Query 67045 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCT 67101 || || | ||||||||| || ||||||||| ||||| |||||||||| Sbjct 57 GGGCGATTCGCTGCCCGGCCTGCAGGCCCGCCTCATGAGCCAGGCGCTGCGCAAGCT 1 >seq665 Length=19784 Score = 168 bits (186), Expect = 3e-37 Identities = 274/391 (70%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 67085 CAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTC 67144 ||||| ||||||||||||| | ||| ||| | |||||| || ||| || Sbjct 7 CAGGCGCTGCGCAAGCTCACCGCCACGATCAAGAAGACCAACTGCATGGTCATCTTCATC 66 Query 67145 AACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGC 67204 |||||| | ||| |||||||||| || | | |||| ||||||||||| ||| Sbjct 67 AACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCC---GAGACCACCACCGGC 123 Query 67205 GGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAG 67264 || || || ||| ||||||||| || || ||| |||| |||| |||| || |||| Sbjct 124 GGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCATC 183 Query 67265 AAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTG 67324 ||| | ||||| ||||| |||||||| ||| ||| || ||||||||||||||| || Sbjct 184 AAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTG 243 Query 67325 GCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAG 67384 || || ||| | | || |||||| | || ||| ||| |||||||||||||| || Sbjct 244 GCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCGAA 303 Query 67385 GTCGAACTCCTCGACCTGGCCGT-GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 67443 | ||| || ||||| ||| ||| ||| || | | ||||||| |||||||||| Sbjct 304 GGCGAGGTCATCGACATGGGCGTCAACGC-CCGCATCATCGAGAAGTCCGGCGCCTGGTA 362 Query 67444 CAAGTACGGGGACAAGAACGTCGCTCAGGGC 67474 | ||| || | |||| ||| |||||| Sbjct 363 CGCCTACAAGGGCGAGAAGATCGGCCAGGGC 393 >seq121 Length=664 Score = 134 bits (148), Expect = 7e-27 Identities = 206/293 (70%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 67159 GAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAG 67218 |||||||||| ||| |||||| || || || || || ||||| || || ||| Sbjct 7 GAAGATCGGC---GTGATGTACGGCTCGCCCGAAACGACGACCGGCGGCAATGCGCTGAA 63 Query 67219 GTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGA 67278 |||||||| || ||||| | || || || ||||||| | | | ||||| |||| || Sbjct 64 ATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATCGGCTCGGTCAAGGACCGCGAGGA 123 Query 67279 GGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 67338 || |||||||| ||||| ||||| || || ||||||||| | || |||||| | Sbjct 124 AGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAGAACAAGGTCGCGCCGCCGTTCAA 183 Query 67339 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGA 67398 | | ||| ||| | || ||| ||| |||||||| || || ||| || |||| Sbjct 184 GCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATTTCCAAGCTGGGCGAGATCATCGA 243 Query 67399 CCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 67451 ||| | |||| | |||||||| ||||||||||| ||||||||| |||| Sbjct 244 CCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGCTCCTGGTTCAGCTACG 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242846337537488