Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq1332 109 4e-19 seq441 87.8 1e-12 >seq1332 Length=137326 Score = 109 bits (120), Expect = 4e-19 Identities = 127/169 (75%), Gaps = 7/169 (4%) Strand=Plus/Plus Query 99393 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 99452 |||||| ||||| || | ||| || || || |||||||| |||||||||| || || || Sbjct 113340 CTTGATCAGGCCGGTGATCACGTCGACCGAAGGCCGCTGGGTCGCCAGGATCAGGTGGAT 113399 Query 99453 GCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTA 99512 |||||| || |||||||||||||| | ||| | ||| | || | | |||||| Sbjct 113400 GCCGGCGGCGCGCGCCTTCTGCGCCAGGCGAGCGATGAGCTCTTCGATC---TTCTTG-- 113454 Query 99513 GCCAC--CCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGT 99559 |||| ||||||| || || |||||||| || | ||| |||||||||| Sbjct 113455 CCCACCACCATCATCAGGTCGGCGAGTTCGTCGATCACCACCACGATGT 113503 Score = 82.4 bits (90), Expect = 5e-11 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 99774 GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCGATCCGGTCGCGCC 99833 ||| |||||||| | | ||| | ||||||| | |||||||| |||||||| | ||| Sbjct 113805 GTAAAGCAGCGACAGGATCATCGCGTTGATGCCGACCGACTTGCCGGATCCGGTGGTGCC 113864 Query 99834 AGCCACCAGCAGATGCGGCATCTTAGCCAGGTTCAGGGA-GATGTCCTTGCCCTCGACGT 99892 |||||||||| ||||||||||| |||||| || | | || ||||| ||| || Sbjct 113865 GGCCACCAGCACGTGCGGCATCTTGGCCAGG-TCGGCCACGACAGGATTGCCGACGATGT 113923 Query 99893 CCTTGCCCA 99901 ||||||||| Sbjct 113924 CCTTGCCCA 113932 >seq441 Length=3058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 99375 CCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGT 99434 ||||| |||| ||| |||||| | ||| || | || || || ||||| |||||||| Sbjct 1517 CCGCGTCGGCAGGTTCGCCTTGATCACGCCGGTGATGACGTCGACCGAGGGGCGCTGCGT 1576 Query 99435 CGCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCG 99482 ||||| || ||| || ||||| ||||| |||||||| ||||||| ||| Sbjct 1577 CGCCATGATGAGGTGGATGCCCGCCGCGCGCGCCTTTTGCGCGAGGCG 1624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354631426289064