Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq934 118 2e-21
seq1640 105 2e-17
seq2704 86.0 1e-11
>seq934
Length=187681
Score = 118 bits (130), Expect = 2e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || ||| ||| ||||| || |||||||| || || || | || ||||| |||||
Sbjct 10244 TGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGC 10185
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| || | ||||| || || || || || || ||||| || || |||
Sbjct 10184 TTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGATTTTT 10125
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || || || || | || || | ||| ||||||| ||||||||||| || ||
Sbjct 10124 GTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTC 10065
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| ||| || |||||||| |||||
Sbjct 10064 AATGTCTTCACAAATATTTGCAT 10042
>seq1640
Length=153026
Score = 105 bits (116), Expect = 2e-17
Identities = 133/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
|||||||||||||| || | || | ||||| || || || ||||| ||||||||
Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTC 104490
| | ||| || |||||||| || ||||| || ||||||||| ||||| || ||||| ||
Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATC-TTGCTCTTGACATTGTC 9802
Query 104491 TACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || ||||| | || ||||| || || |||||||| || || || || || || ||
Sbjct 9803 GATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862
>seq2704
Length=633058
Score = 86.0 bits (94), Expect = 1e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
||||| ||||| || || || ||||| || || || ||||||||| ||||||| |||
Sbjct 56586 GTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCTGG 56527
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||||||| | ||||||||||| || | || ||||| || ||| |||| | | |||
Sbjct 56526 CTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCGAC 56467
Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284
|| || | ||| ||||| || |||
Sbjct 56466 GAGGGCCTCCACACTGACTTTGCCTGT 56440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151358214756592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |