Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq934 118 2e-21 seq1640 105 2e-17 seq2704 86.0 1e-11 >seq934 Length=187681 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || ||| ||| ||||| || |||||||| || || || | || ||||| ||||| Sbjct 10244 TGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGC 10185 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| || | ||||| || || || || || || ||||| || || ||| Sbjct 10184 TTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGATTTTT 10125 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || || || || | || || | ||| ||||||| ||||||||||| || || Sbjct 10124 GTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTC 10065 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | ||| || |||||||| ||||| Sbjct 10064 AATGTCTTCACAAATATTTGCAT 10042 >seq1640 Length=153026 Score = 105 bits (116), Expect = 2e-17 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 |||||||||||||| || | || | ||||| || || || ||||| |||||||| Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTC 104490 | | ||| || |||||||| || ||||| || ||||||||| ||||| || ||||| || Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATC-TTGCTCTTGACATTGTC 9802 Query 104491 TACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | || ||||| | || ||||| || || |||||||| || || || || || || || Sbjct 9803 GATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862 >seq2704 Length=633058 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| ||||| || || || ||||| || || || ||||||||| ||||||| ||| Sbjct 56586 GTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCTGG 56527 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||||||||||| || | || ||||| || ||| |||| | | ||| Sbjct 56526 CTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCGAC 56467 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || || | ||| ||||| || ||| Sbjct 56466 GAGGGCCTCCACACTGACTTTGCCTGT 56440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151358214756592