Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2254 95.1 2e-15 seq755 95.1 2e-15 >seq2254 Length=260216 Score = 95.1 bits (104), Expect = 2e-15 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 16570 CTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGAC 16629 |||||| || |||| |||| |||||| || || ||||||||||| || |||||||| Sbjct 80431 CTTCCTTGAGTCCGTCATCCGTGATGCCGTCACGTACACCGAGCACGCGAAGCGTAAGAC 80372 Query 16630 TGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTT 16689 |||||| || | ||| |||||||||| |||| || || ||||||| | || ||||| Sbjct 80371 TGTCACTTCTCTTGATGTCGTCTATGCTCTGAAGCGACAGGGCCGTACCCTGTACGGTTT 80312 Query 16690 TGGAAGTTAA 16699 || ||||| Sbjct 80311 CGGTGGTTAA 80302 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||||| | || || |||||||| || ||||||||||| || || Sbjct 80640 GCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCTGCCAT 80582 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 || ||||| |||||||| ||||| ||||||||| |||||| Sbjct 80581 TCGCCGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATCTCTG 80541 >seq755 Length=307779 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||||| || ||||||||||| || || ||||| ||||| Sbjct 40961 GCCAAGCGTCACAGAAAGAT-TCTTCGTGACAACATCCAAGGCATTACAAAGCCTGCTAT 41019 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| || || |||||||| ||||||||| |||| Sbjct 41020 CCGTCGTCTTGCCCGCCGTGGTGGTGTCAAGCGTATCTC 41058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072709427732