Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2528 206 3e-48 seq2704 95.1 2e-14 >seq2528 Length=594046 Score = 206 bits (228), Expect = 3e-48 Identities = 588/900 (65%), Gaps = 14/900 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || |||||||| || |||||| |||| || || |||| ||||| | ||| | | Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| | || || || |||||||| | ||| || |||| ||||| | ||| Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 63314 ||||| | | ||| |||||| ||||| | |||||| ||||| | || | Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276 Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374 | ||||| || ||||| ||||| | || ||||| | | || || ||||| || || Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 ||||| || | || | ||| ||||| || | || | | ||| || || || ||||| Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT----TACTAATTGA 63490 || ||||| || || | || ||| ||| ||||||| ||| ||| ||| | Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 |||| || || || || | || || || | ||| || ||| | ||| || ||||| Sbjct 61097 --GACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 ||| || || ||||| || |||||| | || |||||| | |||||| | | Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 ||||||||| || || | || ||||||||||| || || |||||| || | | ||| Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 ||| || ||||| || || || ||| ||||| || || || || ||||| | Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860 Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790 ||||||||| || | || | | |||| || || ||||| || || || | Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800 Query 63791 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 || || || |||||||| | ||| ||| || || ||||||| |||| ||||||| || Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740 Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTT 63910 | || | || |||| || || || | || || || || | | Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTCGTAAGTTTTTTGAGAGATCATAGGTGCTGGGCG 60680 Query 63911 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 63970 || || || || || || | | | ||| || || || | ||| ||||||| Sbjct 60679 GTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTTTTTT 60620 Query 63971 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 || | ||| || || || |||||||||||||||||||| || || ||||| || ||||| Sbjct 60619 CGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTGGATG 60560 Score = 98.7 bits (108), Expect = 1e-15 Identities = 684/1095 (62%), Gaps = 23/1095 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| ||||| || || | | || || || |||||||| || ||||| || Sbjct 62656 GTGAATTGAATTGGAGCAGACGCTGCCATGGTTCGGAGGTAGTACATCCCGGTTTTCAGG 62597 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || || |||||||| ||| ||||| || || | |||| | || || | Sbjct 62596 CCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGCTCCTTCAAG 62537 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 |||||||||| |||||| || |||||||| || || | || |||||||| | | Sbjct 62536 TGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGCCATCTGAACA 62477 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || | || | |||||||| | || ||||| | | |||||||| | || | Sbjct 62476 ATGGTTCTCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAATATCCGCAGGGATA 62417 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | | ||||| || || || || || || || || | ||||| || | || | Sbjct 62416 TTGGGGATGTTCTGGATCGAACCGCCTTCAGCAATGATACGGTTCTTCATATTGTCCGAC 62357 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | ||| | | || | || || || ||||| ||||| || || || Sbjct 62356 CACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGGGTTAACGACTTGGAACTCGCCT 62297 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | |||| || || || || || || || | | || || ||| Sbjct 62296 GCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAATCCG 62237 Query 62412 AAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470 | || ||| | | || | ||||| ||||||||||| || | | ||| || | | ||| Sbjct 62236 AGGATCTGA-CTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCAGACTGTTGCGTACACC 62178 Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530 | | | ||| | | ||| || | ||||||| |||||| || | || || Sbjct 62177 ATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGTCAGTTGGCGTCACGTT 62118 Query 62531 NNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATCGT 62586 || | | |||| | ||| || | | ||| | || || || | Sbjct 62117 CCACATATCATACTGCAAAGTACCCTGAGATACAGGAG----AGCCTTCGTAGGTCTCAT 62062 Query 62587 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62646 | || || || | || | || ||| ||| || || | | |||||| |||| Sbjct 62061 AGGGCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCCGCATGATAAATTGTTT 62002 Query 62647 CGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG-A 62705 | ||||||| |||| | | | || || | ||||||||| ||| || | | Sbjct 62001 CAAAGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAATGGC-AATCGGAGCGCA 61943 Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 | || || || || | ||||| || |||| ||||||| | ||| | |||| Sbjct 61942 AGGAAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGATGACGGAAATTACTC 61883 Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62825 | ||||| || | |||||| | || |||| |||||||| || ||||| | |||| Sbjct 61882 TTGCGGGCTTCAGGGACAGGATAGTGGTTGTTATCAATAATTTTGTTCAGATTGCGGACA 61823 Query 62826 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-TCGCC-CATCTATTACAAAC- 62882 | |||| || || | || |||| ||| ||| | ||||| | | | ||| Sbjct 61822 AGAACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCGCCACGAACAGGATCAACG 61763 Query 62883 -ATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 62939 |||| |||||||| |||||||| || ||||| || || |||| | | | || Sbjct 61762 TATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTAC 61703 Query 62940 TGTATTATCTCAGTGCAAAGATTACTACACTTGA-TAGTTCCTAAATTTTGTTGATTACT 62998 | || || || ||||| || || | | | || ||||||| | |||| || || || Sbjct 61702 TCGATGATTTCCGTGCAGAGGTT-CGAGCTTCGAATAGTTCCAAGGTTTTTCTGGTTGCT 61644 Query 62999 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63058 ||| ||| ||||||||||| ||||| ||||| || |||| || || |||||| ||| Sbjct 61643 CTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTC 61584 Query 63059 TATAATCGCTTTCCA 63073 || || || | ||| Sbjct 61583 TAGGATGGCATACCA 61569 >seq2704 Length=633058 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||| || |||||||| | ||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 56455 GTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCC 56514 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || || || || || || ||| || ||||| || || || || Sbjct 56515 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCCTCAACGGC 56574 Query 33438 AGCAAAGGCAATAAG 33452 |||||||||| ||| Sbjct 56575 TGCAAAGGCAACAAG 56589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622925988647840