Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2704 127 2e-24 seq934 114 1e-20 seq1640 111 1e-19 seq1954 100 3e-16 >seq2704 Length=633058 Score = 127 bits (140), Expect = 2e-24 Identities = 344/514 (67%), Gaps = 13/514 (3%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATC-AACAGCAGCACCGCGAC 46145 || ||| | || ||||| | || ||||| || |||||| || | ||| | | || Sbjct 56661 CCTTGCATCCGTAAGAAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAAT-CAAC 56603 Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205 ||| ||| |||| | || |||||||| || ||||| ||||||| |||| ||| Sbjct 56602 TTTTGCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTT 56543 Query 46206 TGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 |||| | ||||| | | || | ||| | ||||| ||||| || || ||| || Sbjct 56542 TGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGA 56483 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACACTC 46324 ||||| || |||||||||||||| || || |||||||| |||| ||| | | ||| Sbjct 56482 ACTGATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCT 56423 Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGT--TCAAGGAGGCGGTGGC 46382 ||| ||| | | || ||| | |||| ||| ||| ||| || || || | Sbjct 56422 TCGT-CAC--CGCCCGAGC-CCCCAGGCCGT--CGAGGCTGTTATCACAGAAGCTGTCGA 56369 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC-GCAC 46441 || || || || || || || | || || || ||||| || ||||||||| || Sbjct 56368 GATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAA 56309 Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC 46501 | || |||||| | |||||||||||||| || ||| | |||| || ||| | Sbjct 56308 ACTC-ATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCGCTCTTGGTAATA 56250 Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561 |||| | | | | ||| || ||||| || || ||| ||||||| || ||| || | Sbjct 56249 AGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCGGTA 56190 Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | || || || || || |||||||||||||| || Sbjct 56189 AGACAAACTTCTTTGAGAAGCGCGTCGGCGACTA 56156 >seq934 Length=187681 Score = 114 bits (126), Expect = 1e-20 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || || || | ||||| ||| |||||||||||||||||||| || | Sbjct 10040 CCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTC--TG 9983 Query 131068 ATGGTGCGCGAG--TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||| |||| || || ||||||||||| ||| | |||| ||| |||||||| || | Sbjct 9982 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTG 9923 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCG 131184 | ||||| || ||||| |||||| || || | | | || | || || | || || Sbjct 9922 GAATTCCCTCCTTGTCTTGGATTTT-TGTTTTAACGTTATCGATCGTGTCTGAAGATTCA 9864 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | || | || || ||||| | || || |||||||||||||| Sbjct 9863 ACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | ||| |||||||| ||||||||||| || | ||||| Sbjct 9504 CGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCA 9445 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||| || || ||| |||| || || |||||||| |||||||| || || ||| Sbjct 9444 TCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTG 9385 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||| | | || | ||||| ||||||| | |||| || | | Sbjct 9384 TCCTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATG 9325 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || || ||||| || |||||||||||||| Sbjct 9324 GTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | ||| || ||||| |||||||| ||||| Sbjct 9812 CCACCGCGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAG 9753 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct 9752 AGAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGG 9693 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || || | | || | ||||| | ||||| | Sbjct 9692 ATGCCTTCCTTGTCTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACT 9633 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || | ||| || ||||| ||||| || || Sbjct 9632 TCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGAC 9598 >seq1640 Length=153026 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||| || |||||||||| |||||| |||||| |||||||| || || | | Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | |||||||||||||| |||||||| ||||| ||||| || || ||||| | | Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGT 9801 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | |||| ||| | || || ||||| || || || |||| Sbjct 9802 CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 9861 Query 131225 A 131225 | Sbjct 9862 A 9862 >seq1954 Length=527115 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | ||| |||||||| || ||||||||||| Sbjct 282729 CCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 282670 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||| ||||| ||| |||| | ||| |||||||| || ||| Sbjct 282669 AGGGTGCGGCCGTCCTCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGG 282610 Query 131128 ATTCCTTCTTTGTCGGTGAT 131147 || || || ||||| | ||| Sbjct 282609 ATGCCCTCCTTGTCTGGGAT 282590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471996727964160