Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2704 127 2e-24
seq934 114 1e-20
seq1640 111 1e-19
seq1954 100 3e-16
>seq2704
Length=633058
Score = 127 bits (140), Expect = 2e-24
Identities = 344/514 (67%), Gaps = 13/514 (3%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATC-AACAGCAGCACCGCGAC 46145
|| ||| | || ||||| | || ||||| || |||||| || | ||| | | ||
Sbjct 56661 CCTTGCATCCGTAAGAAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAAT-CAAC 56603
Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205
||| ||| |||| | || |||||||| || ||||| ||||||| |||| |||
Sbjct 56602 TTTTGCCCAGCGCCTTGTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTT 56543
Query 46206 TGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265
|||| | ||||| | | || | ||| | ||||| ||||| || || ||| ||
Sbjct 56542 TGCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGA 56483
Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACACTC 46324
||||| || |||||||||||||| || || |||||||| |||| ||| | | |||
Sbjct 56482 ACTGATTTCCCGCGACGAGGGCCTCCACACTGACTTTGCCTGTCTTCTCTTCTCTCACCT 56423
Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGT--TCAAGGAGGCGGTGGC 46382
||| ||| | | || ||| | |||| ||| ||| ||| || || || |
Sbjct 56422 TCGT-CAC--CGCCCGAGC-CCCCAGGCCGT--CGAGGCTGTTATCACAGAAGCTGTCGA 56369
Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC-GCAC 46441
|| || || || || || || | || || || ||||| || ||||||||| ||
Sbjct 56368 GATCGAAAAAGAATTCTTGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAA 56309
Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC 46501
| || |||||| | |||||||||||||| || ||| | |||| || ||| |
Sbjct 56308 ACTC-ATGTGCCAATACATCGAGTTTGTCGCCGACAGGTTGCTTGTCGCTCTTGGTAATA 56250
Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561
|||| | | | | ||| || ||||| || || ||| ||||||| || ||| || |
Sbjct 56249 AGAAGTACTATAATGCGACGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCGGTA 56190
Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
| || || || || || |||||||||||||| ||
Sbjct 56189 AGACAAACTTCTTTGAGAAGCGCGTCGGCGACTA 56156
>seq934
Length=187681
Score = 114 bits (126), Expect = 1e-20
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| || || || | ||||| ||| |||||||||||||||||||| || |
Sbjct 10040 CCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTC--TG 9983
Query 131068 ATGGTGCGCGAG--TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
| ||| |||| || || ||||||||||| ||| | |||| ||| |||||||| || |
Sbjct 9982 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTG 9923
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCG 131184
| ||||| || ||||| |||||| || || | | | || | || || | || ||
Sbjct 9922 GAATTCCCTCCTTGTCTTGGATTTT-TGTTTTAACGTTATCGATCGTGTCTGAAGATTCA 9864
Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
| || | || | || || ||||| | || || ||||||||||||||
Sbjct 9863 ACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| || || || || | ||| |||||||| ||||||||||| || | |||||
Sbjct 9504 CGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCA 9445
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
|| || ||||| || || ||| |||| || || |||||||| |||||||| || || |||
Sbjct 9444 TCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTG 9385
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||| | | || | ||||| ||||||| | |||| || | |
Sbjct 9384 TCCTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATG 9325
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||||| || || ||||| || ||||||||||||||
Sbjct 9324 GTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | ||| || ||||| |||||||| |||||
Sbjct 9812 CCACCGCGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAG 9753
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| ||||||||||| |||||||||
Sbjct 9752 AGAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGG 9693
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || || | | || | ||||| | ||||| |
Sbjct 9692 ATGCCTTCCTTGTCTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACT 9633
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || | ||| || ||||| ||||| || ||
Sbjct 9632 TCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGAC 9598
>seq1640
Length=153026
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||| || |||||||||| |||||| |||||| |||||||| || || | |
Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| |||||||||||||| |||||||| ||||| ||||| || || ||||| | |
Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGT 9801
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || ||| | ||||| | |||| ||| | || || ||||| || || || ||||
Sbjct 9802 CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 9861
Query 131225 A 131225
|
Sbjct 9862 A 9862
>seq1954
Length=527115
Score = 100 bits (110), Expect = 3e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | ||| |||||||| || |||||||||||
Sbjct 282729 CCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 282670
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||| ||||| ||| |||| | ||| |||||||| || |||
Sbjct 282669 AGGGTGCGGCCGTCCTCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGG 282610
Query 131128 ATTCCTTCTTTGTCGGTGAT 131147
|| || || ||||| | |||
Sbjct 282609 ATGCCCTCCTTGTCTGGGAT 282590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471996727964160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |