Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_008194.1 Length=74483 Score E Sequences producing significant alignments: (Bits) Value seq1406 210 1e-49 seq183 185 4e-42 seq665 183 1e-41 seq121 149 3e-31 >seq1406 Length=1376 Score = 210 bits (232), Expect = 1e-49 Identities = 355/511 (69%), Gaps = 5/511 (1%) Strand=Plus/Plus Query 65321 GCCCTGGCCGAGGTCGATAAACGC-TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAA 65379 ||||| || || ||||| ||| |||||| || ||||| |||||||| || | || Sbjct 808 GCCCTCGCGCAGATCGATCG-CGCGTTCGGCAAGGGCTCGGCAATGAAGCTCGGCCAGAA 866 Query 65380 GC---CACAGACTGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGG 65436 | | || || || ||| | | |||||| ||| || ||| ||| || || Sbjct 867 GGAGGCGATGAAGGTCGAGGTCGTCTCGACCGGCAGCCTCGGGCTCGACATCGCGCTCGG 926 Query 65437 CATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAA 65496 | |||| || || | |||||| | || || |||| |||||| ||||| || || || Sbjct 927 CGTCGGCGGCCTGCCCAAGGGCCGTATCGTCGAGATCTTCGGCCCCGAATCCTCGGGCAA 986 Query 65497 GTCAACTCTATGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTA 65556 | | || || ||||||||| | ||| | |||| ||||| || |||| ||| || | Sbjct 987 GACGACGCTCGCGCTCCACGCGATCGCCGAATCGCAAAAGGCTGGCGGCACCGCGGCGTT 1046 Query 65557 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 65616 | ||||||| |||||| | || || || | || |||||| ||| || || || |||| Sbjct 1047 CGTCGACGCCGAGCACGCGCTCGATCCCGCTTATGCCAAGAAGCTGGGCGTCAACATCGA 1106 Query 65617 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 65676 | | || | || ||||| || || ||||||||||| || |||||||| ||| || Sbjct 1107 CGAACTGATCGTCTCGCAGCCCGATACCGGCGAGCAGGCGCTTGAGATCGTCGACACGCT 1166 Query 65677 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 65736 |||| || || | | | | | || || || || || || || || |||||||| Sbjct 1167 CGTCCGCTCGAACGCGATCGACGTGCTGGTGGTCGATTCGGTCGCCGCGCTCGTGCCGCG 1226 Query 65737 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 65796 |||||| |||| ||||| || || ||||| ||||||||||| || |||||||| ||| Sbjct 1227 CGCCGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTTCAGGCGCGCCTGATGAG 1286 Query 65797 GCAGGCCATGCGCAAGCTCACTGGCACCATC 65827 ||||| |||||||||| || ||||| ||| Sbjct 1287 CCAGGCGCTGCGCAAGCTTACCGGCACGATC 1317 >seq183 Length=814 Score = 185 bits (204), Expect = 4e-42 Identities = 293/417 (70%), Gaps = 10/417 (2%) Strand=Plus/Minus Query 65403 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65462 |||||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| | Sbjct 412 CCACCGGCTCGCTGGGGCTGGACGTCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 353 Query 65463 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGGTGG 65522 || | || ||||||||||| ||||| ||||| ||| | || || || || | | | Sbjct 352 TGATCGAGATCTACGGCCCGGAATCGTCAGGCAAGACCACGCTGACGCTGCAGGTCATCG 293 Query 65523 CCAATGCGCAGA---AGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGG 65579 || | |||| ||||||| || | ||||| | ||||||| |||||| | |||| Sbjct 292 CCGAGATGCAGCGCCAGGCCGG---CACCTGCGCCTTCGTCGACGCCGAGCACGCGCTGG 236 Query 65580 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 65639 || | ||||||| || ||| || || |||| | | || || | ||||||| Sbjct 235 ACACCCAGTACGCGCAGAAGCTGGGCGTCAACCTGCAGGAGCTGCTGATCAGCCAGCCGG 176 Query 65640 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC-- 65697 |||| ||||||||||| ||||||||||| ||| ||| || || ||| || ||| Sbjct 175 ACACCGGCGAGCAGGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGC--GCCGTCGA 118 Query 65698 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 65757 | | ||||| | ||||| |||||||| |||||||| |||||| |||| ||||| || Sbjct 117 CCTGATCGTCATCGACTCGGTGGCGGCGCTGGTGCCCAAGGCCGAGATCGAGGGCGAGAT 58 Query 65758 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCT 65814 || || | ||||||||| || ||||||||| ||||| |||||||||| Sbjct 57 GGGCGATTCGCTGCCCGGCCTGCAGGCCCGCCTCATGAGCCAGGCGCTGCGCAAGCT 1 >seq665 Length=19784 Score = 183 bits (202), Expect = 1e-41 Identities = 277/391 (71%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 65798 CAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTC 65857 ||||| ||||||||||||| | ||| ||| | |||||| || ||| || Sbjct 7 CAGGCGCTGCGCAAGCTCACCGCCACGATCAAGAAGACCAACTGCATGGTCATCTTCATC 66 Query 65858 AACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGC 65917 |||||| | ||| |||||||||| || | | |||| |||||||||||| ||| Sbjct 67 AACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCC---CGAGACCACCACCGGC 123 Query 65918 GGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAG 65977 ||||| || ||| ||||||||| || || ||| |||| |||| |||| || |||| Sbjct 124 GGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCATC 183 Query 65978 AAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTG 66037 ||| | ||||| ||||| |||||||| ||| ||| |||||||||||||||||| || Sbjct 184 AAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTG 243 Query 66038 GCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAG 66097 || || ||| | | || |||||| | || ||| ||| |||||||||||||| || Sbjct 244 GCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCGAA 303 Query 66098 GTCGAACTCCTCGACCTGGCCGT-GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 66156 | ||| || ||||| ||| ||| ||| || | | ||||||| |||||||||| Sbjct 304 GGCGAGGTCATCGACATGGGCGTCAACGC-CCGCATCATCGAGAAGTCCGGCGCCTGGTA 362 Query 66157 CAAGTACGGGGACAAGAACGTCGCTCAGGGC 66187 | ||| || | |||| ||| |||||| Sbjct 363 CGCCTACAAGGGCGAGAAGATCGGCCAGGGC 393 >seq121 Length=664 Score = 149 bits (164), Expect = 3e-31 Identities = 209/293 (71%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 65872 GAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAG 65931 |||||||||| ||| |||||| || ||| || || || |||||||| || ||| Sbjct 7 GAAGATCGGC---GTGATGTACGGCTCGCCCGAAACGACGACCGGCGGCAATGCGCTGAA 63 Query 65932 GTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGA 65991 |||||||| || ||||| | || || || ||||||| | | | ||||| |||| || Sbjct 64 ATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATCGGCTCGGTCAAGGACCGCGAGGA 123 Query 65992 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 66051 || |||||||| ||||| |||||||| || ||||||||| | || |||||| | Sbjct 124 AGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAGAACAAGGTCGCGCCGCCGTTCAA 183 Query 66052 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGA 66111 | | ||| ||| | || ||| ||| |||||||| || || ||| || |||| Sbjct 184 GCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATTTCCAAGCTGGGCGAGATCATCGA 243 Query 66112 CCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66164 ||| | |||| | |||||||| ||||||||||| ||||||||| |||| Sbjct 244 CCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGCTCCTGGTTCAGCTACG 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238212891367216